Larimichthys crocea (large yellow croaker): 104940436
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Entry
104940436 CDS
T04659
Name
(RefSeq) iroquois-class homeodomain protein irx-4
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104940436
Transcription factors [BR:
lco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
104940436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
104940436
NCBI-ProteinID:
XP_010755343
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Position
XIII:complement(21404728..21411486)
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AA seq
478 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTTCCESTGRSIADSGVAASGQTPVYCPVYESRLLATA
RHELSSAAALGVYGSPYTGGQGYGNYVTYGTDASAFYSLGTFDTKDATASAHAGITQATA
YYPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDEDEDGSQEEQIKSENNEDET
RSRPDKDLQLSDLDDFDTLESENSECELKHRYHMNTHMSTTSDCPGEHLIKDTSLKISIP
VSLGGEQDLSKSCLKTNPEDFQPGSRQQVKACYNQQQQQQQQQGPQILDGKPRIWSLAQT
ATSLNQTEYPSCMLRCQPPPSSLSPSPAATSPVTGLDNRQDSPVTTLRNWVDGVFHDPLF
RHSTLSQALTNTTVSWTTNTKGAILEAERSTAALQQHHDSSKDSAMAFPKTINKLFCS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaatttggatatccctattcgtctgctccacaattcctgatgacaacc
aactctctgaccacttgctgcgagtccaccggcagatccatagccgactccggagtagcg
gcatccgggcagacaccagtctactgtccggtgtacgagagccggttgctggccacggca
aggcatgaactcagctcagccgccgcgctgggcgtgtacgggagcccatacaccggcgga
caaggctatgggaattacgttacatatggcacggacgcctcggctttctactcgctgggc
acgttcgatactaaagatgccacagcttctgcgcatgcgggaataacccaggcaacagcc
tactatccttatgatcctaccctgggacagtatcagtatgacagatatggttccatggac
gggggaacaaggcggaagaatgccacgcgtgagacgaccagcacgctgaaggcctggctg
caggagcacaggaaaaacccatatccaaccaaaggggagaagatcatgctagccatcatt
accaagatgactctgacgcaggtctccacctggttcgcgaatgccaggaggaggctcaag
aaggagaacaagatgacatggccgcccagaaacaagggctcagaggagaagagatatgac
gaggatgaggatgggtctcaggaggagcagataaaaagcgagaacaatgaggatgaaacc
agaagtcggcctgataaggacctccagttgagcgacttggatgattttgatacactggag
tctgagaactctgagtgtgagctgaagcaccgataccacatgaacacacacatgtcaacg
acaagcgactgccccggcgaacacctcattaaagacacgtctctgaaaatctccatccct
gtttctctgggaggggagcaggacttgagcaaaagttgtctcaaaacgaatccggaggat
ttccaaccgggcagcagacagcaggtgaaggcatgctataaccagcaacagcagcagcag
cagcagcaagggccccagattttagacggcaaacctcggatctggtctttggcccaaact
gcgacgtccctgaaccagactgagtacccgtcctgtatgctgaggtgccagccgccgccc
tcctccctcagcccatcccccgccgctacctcacccgtgaccggcctggacaacaggcag
gactcgccggtcacaaccctgagaaactgggtggacggggttttccacgaccccttgttc
aggcacagcactttgagccaggctctgaccaacaccaccgtctcttggaccacgaacacc
aaaggcgccattctggaggctgagaggagcacggcggccttgcagcagcaccacgactcc
tccaaagacagtgccatggctttcccaaaaactatcaacaaacttttctgctcctaa
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