Larimichthys crocea (large yellow croaker): 104940554
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Entry
104940554 CDS
T04659
Symbol
col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
lco
Larimichthys crocea (large yellow croaker)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
PA14
Motif
Other DBs
NCBI-GeneID:
104940554
NCBI-ProteinID:
XP_010755491
UniProt:
A0A6G0HSJ8
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Position
XIII:complement(46647092..46690214)
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AA seq
688 aa
AA seq
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MLVTMLLAPVCVILMLGSRALAGGYPPIPHMKYMQPMMKGPIGPPFREGKGHYVDMPPMM
EVKGEPGPQGKPGPRGPPGPPGLPGKPGLGKPGLNGQPGPQGPSGFPGIGKPGLPGLPGK
IGPKGIPGLNGEVGLRGEPGPRGPPGQPGLPGPAGLSLNGKPGVPGMRGPPGSRGEPGLK
GGVGPPGDRGLKGENGNGKPGPPGIRGLPGVKGSTGPAGLPGIGKPGPKGLSGMPGLKGD
QGLPGDHGLPGEPGPPGLQGLPGPIGIGKPGLDGQPGGPGQLGPKGEPGPRGSPGFPGTP
GYGKPGLSGPKGDKGHSGLPGLPGDKGEQGMVGPIGEPGLDGQAGPPGLQGPMGLPGQHG
MPGLKGEIGPQGPPGLPGLRGDQGLNGPSGKPGIPGDKGIPGLNGPIGKPGPKGEAGHIG
LPGNPGLTGAPGPKGETGFMGTPGPRGQSGIPGLQGPMGPMGPQGAPGLKGESGLTGPPG
MGKLGEKGAMGPQGPPGKPGPSGLNGNPGLPGPPGPPGPPGNGQTVVAGPTDTQLEGDEV
PGDRKGSVFGQVAVSASVAPAFTAILTTPFPPSAMPIKFDRTLYNGQNAYSSATGMFTAP
LSGVYYFAYHMHVKGTSLWVALYKNNVPATYTYDEYKKGYMDQASGSAVLELKEGDQVWV
QMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgaccatgctgttggctcctgtttgtgtgatactgatgctggggtcgcgagct
cttgctggaggctatccccccataccccacatgaagtacatgcagcccatgatgaaaggg
cctattggacccccattcagagagggcaagggacattacgttgatatgccaccaatgatg
gaggtaaagggggaacccggcccccaagggaaacctggaccgagaggcccccctgggccc
ccaggacttccaggaaaacctggactgggcaaaccgggtctcaatggccagccaggccct
caggggccttctggatttcctggaattggtaagcctggacttccaggtctcccaggaaag
attgggccaaaggggataccaggtcttaatggcgaggttggtcttcgtggtgaaccaggt
cccagaggtcctccagggcagcctggccttcctggcccagctggcctatccctgaatggg
aaacctggggttccaggcatgagaggcccccctgggtctcggggtgaaccaggactaaaa
ggtggtgttggcccaccaggtgatcgtggacttaagggtgagaatggaaacgggaagcca
gggcctccaggtataaggggtcttcctggggtgaaaggcagtacaggaccagctggtctt
ccaggtataggcaaaccaggaccaaaaggtttgtcaggaatgcctggtcttaaaggtgat
caaggactcccaggggatcatggactaccaggagagcctgggcctccaggtctacaaggt
ctgccggggccaattgggatagggaagcctgggctagatggacaacctggaggaccaggt
caactcggtccaaagggtgagccagggcccaggggttctcctgggtttcctgggactcct
ggctatggaaaacctggtctgagtgggccaaaaggggataaaggccacagtgggttgcct
ggtctaccaggggataaaggagaacaaggaatggtgggccctattggagagccaggcctt
gatggacaagcagggccaccaggacttcaaggcccaatgggactaccaggacaacatgga
atgccaggattgaagggagagattgggccccagggccctccaggactgcctggcctcaga
ggtgaccaaggcctcaatggaccctctggaaaacctggcatccctggggacaaaggcatc
cctgggcttaatggtcctattggaaaacctggacccaaaggtgaggcagggcatattggc
ttacctgggaatccagggctgacaggtgctccaggccctaaaggtgagacagggtttatg
gggactccaggaccaaggggccagtcaggcattcctggtcttcagggcccgatgggtccc
atggggccacagggtgcccctggcctaaagggtgaatctggacttacagggcctccagga
atgggtaagctgggagagaagggagctatgggtccccaaggtcctccagggaaaccaggc
ccttctgggcttaatggtaaccctggccttcctgggcctccagggccccctggtcctcca
ggaaatggccaaacagttgttgcagggccaacagatacacagttggaaggcgatgaagta
ccaggggacaggaaagggtctgtattcggtcaagttgcagtctctgcctctgtggcacca
gccttcacagccatcctcaccacacctttccctccctctgccatgccaatcaaatttgac
aggaccctgtacaatgggcaaaatgcctacagctctgccactggcatgttcactgctcct
ttatctggtgtctactactttgcataccacatgcatgtaaagggaactagcttgtgggtg
gcactgtacaagaacaatgtaccagccacttacacctatgatgaatacaagaaaggctac
atggaccaggcatctggtagtgctgtcctagagctgaaggagggtgaccaagtatgggtc
cagatgccctcggatcaggcaaatggcctttattctaccgagtacatccactcctccttc
tcaggattcctgctctgtcccacataa
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