Larimichthys crocea (large yellow croaker): 109137046
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Entry
109137046 CDS
T04659
Symbol
ptchd3
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
109137046 (ptchd3)
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Other domain-containing proteins
Patched domain-containing proteins
109137046 (ptchd3)
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
109137046
NCBI-ProteinID:
XP_019109717
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Position
XXIII:5246785..5251469
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AA seq
848 aa
AA seq
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MGCRRTDCLSKPLSGLFEKLGSLVGSWPLYFFVIPLVLTAALSGGFAFLKDREDNDFERQ
YTPKKGPSKATREFVKENFPYNDSMFSEERLYDPGNFASLIAVSTNNLNVLADPAFEEIL
RLNNKILNITVYDGTLGFNDLCAKAYGECVSNIILDIVRSNESSITYPVHTYRSSPVFLG
SVLGGVHAVNNSLISAKAVKLFYYLDDTESKANASRLWLRGFKKLLSEELDKEHIDVSYY
TSKSKQEEIDSHTTDGFPLFLITYACAITFSLISCLRFDNVRNKVWVAVFGVLSAGLAVL
SSFGLLLYIGVPFVITVANSPFLILGIGLNNMFVMVSDWQHTNVKEPVSKRMAHSYKDAV
MPITITALTDVLKFSIGTTSDFPSVQSFCLYTTISIIFCYIYTVTFFGAFLALNGRREAS
NRHWFTCMKIPTDSLDDRSKIHNICCVGGSYDEDTGAEKKQPASNFFKDYYGPFLIKPWV
KGVVIFLYVVYLAASIYGCFHIQQGIELYDLAADNSHVTRFNKKDREYFSDYGPSVMVIV
GDEFPYWDRLTRLGLEECMSSLKRLPFVDEDIYTSWLDTYISYAKENNLNIEHKYLFIKH
LAPFWDSFPYFKQDVNFTGDSFHASRFFIQTINIANASQEIDMLKGLKTTLEGCRVKSML
VYNQNFIFYDQYDVVIKSTIKNVIVITAAMLLVSLLLIPDPLCSLWVACSITSVTVGVTG
LMALWDIQLDSIFMIIFTVCIGFTVDFSAHMSYAFASSKKSCPNDRAVDALASLGYPILQ
GAFSTILGVSVLATSEFHTFRMFFKIFFLVVVIGMVHGLSFIPVIMTIYSCHSNKNKNKD
ENLKMSKL
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcagacgcaccgactgcctctcaaagcctctgtcgggcctttttgaaaaactt
ggatcgctcgtcggctcatggcctctctatttttttgtaattcctcttgtgctcacagcg
gcgctcagcggaggcttcgcttttctcaaagacagggaggacaatgactttgagcggcaa
tacactcccaagaaaggaccctcgaaggcaaccagggagtttgtcaaggagaacttcccc
tacaatgactcgatgttttcagaagaaaggttgtacgacccgggcaactttgcatccctc
attgctgtatcaaccaacaacttgaatgtgctagcagatcctgcctttgaggaaatcctc
agactcaacaacaagatccttaatatcactgtgtacgatgggacgctaggattcaatgac
ctgtgcgcaaaggcctacggagaatgcgtctcaaacatcatcctagacatcgtccgctct
aacgaatccagcatcacctacccggtgcacacatacagatccagcccggtgttcctgggt
tctgtgttaggcggggttcatgctgtcaacaactcactcataagtgccaaggctgtaaaa
ctcttctactacttagatgatacagaaagcaaagcgaacgcctcaagattatggctgaga
ggatttaagaaacttttatccgaagagttggacaaggaacacatcgacgtgtcctactac
acctccaaatccaagcaggaggagattgacagtcacaccacagatggcttccctttattc
ctcatcacttatgcctgcgccatcaccttctcgctgatatcctgcctgagatttgacaat
gtgaggaacaaggtgtgggtggctgtctttggcgtcctctccgctggcttggctgttctc
tcctcttttggcttgctgctttacatcggagtgccgtttgttatcacggtggcaaactcc
cctttcctgatactaggaatcggcctcaacaacatgttcgtcatggtgtccgactggcag
cacaccaacgttaaagagccagtgtcaaaacggatggctcactcctacaaagacgccgtc
atgcccatcaccatcactgccctgaccgacgtcctcaagttctccataggtaccacgtcg
gacttcccgtcagtgcagtcgttctgcttgtacaccaccatctccatcatattctgctac
atctacaccgttaccttctttggagccttcctggctctaaacgggaggcgagaagccagc
aacaggcactggtttacctgcatgaaaataccgacagacagtctcgatgatcgttctaag
atacacaacatctgctgtgtgggaggcagctatgatgaggatactggagcagagaaaaaa
cagccagcgagtaacttctttaaggattactatggcccgtttttgatcaaaccctgggtc
aagggagttgtaatcttcctttatgtggtatatttagctgcaagtatttatggatgtttc
cacatacaacaagggattgagctgtacgatctggcagctgataactcccatgttacgaga
tttaacaagaaggatagagagtatttctctgattacggtccatctgtgatggttatcgtt
ggtgacgaattcccgtattgggatagattaacgagattaggacttgaggaatgcatgtcg
agtcttaaaaggctcccatttgtagatgaggatatctatacatcctggttggacacctac
atatcgtatgctaaagaaaataacttaaacattgaacataaatatctctttatcaaacat
ttagcaccattttgggattcatttccttatttcaagcaggatgtgaacttcacaggagat
tcctttcacgcatcccggttcttcattcagactattaatattgccaatgccagtcaggaa
atcgacatgcttaaaggtcttaaaaccacccttgagggatgccgtgtaaaatctatgttg
gtttataaccagaactttatcttctacgaccagtacgacgtagtaatcaaaagtacgatt
aaaaacgtcatcgtgatcacagccgcgatgttgctcgtctctctcctgctgatcccagac
cccctctgctcgttatgggtggcttgttcgatcacttcagtgactgtcggggttaccggc
ctcatggcgctgtgggacatccagctcgattccatattcatgatcattttcaccgtttgc
atcggcttcaccgtcgatttctccgcccacatgtcttacgccttcgcttcgagcaagaaa
agctgtcctaatgaccgagccgtggatgctctcgccagtttaggctaccccatacttcaa
ggggccttttccaccattttaggggtgtcggtgttggctacgtctgagtttcacacattc
aggatgttctttaagatcttctttcttgtggtggtgattgggatggttcacggcctcagt
ttcattccagtaattatgacaatatattcatgccactcaaataaaaacaaaaataaagac
gagaatttgaaaatgagcaaactatga
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