Larimichthys crocea (large yellow croaker): 109137069
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Entry
109137069 CDS
T04659
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109137069 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
109137069 (rnf43)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109137069 (rnf43)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109137069 (rnf43)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
PA
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
109137069
NCBI-ProteinID:
XP_019109906
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Position
XXII:14029090..14112037
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AA seq
819 aa
AA seq
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MTVPQRRLAGLWPWLLMAALQVVLGQPGLESERPALRAVIKVALLNHEPTGKPITLEGVF
VGGSAGFAEGKLMQYHPLSLCNTSEDERQESDFITIVKLEHRVPRCLPLLDKARMALDKG
AQAVIFDVSDDANAAAELRETDSLPRPVVLVEAEDAEELMGLVNKNEEAKVRIEIMMEQP
RWPHYDVGILLTIVLAILTIILIFAFRYKCKSNRTWDSVHQQTMRAISRLETKTYNSQGC
SGSQRHRAAWGSASSSNSSPVCAICLEEFQDGQHLRIISCAHEFHKDCVDPWLLQHRTCP
LCMHNIMGTERQPQRSRLQQSPEQSQGFLHAQPYSSPRNHPFPQHAIPFSMRPHYPRGPS
GPYPSLGHYTSSSPRDTQTLRFLSRPLGSGCGYHLPVEGPGRPHRIGGNCRTSTQHYTPR
RSCHNYRSSCPAQRSASSSRLHHTTSVAPQSRGAPAHSRQDEGSCSGGSYHTERSGYLAD
GPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGPGRAPR
RNSLEACAQARPRSLDSVVNKAGCPEEQPQTVFNHIHYHRHRHHHYEEGEHSQGPSRGSD
EEQGAAAAAAAAPPAALVLDKDSPVCPPKHSPCQCPKLDPTDRPGPGLECQDHDPGSPTG
PSVLVSPIPIQLQPHCCHQGHGHPPAPLGRVGGCVLEGPSVRFHQSLDLQDDRSIHIHYG
QGPGFCCSPPELHPALLPVPLILDSGGMEDWPCCAGAHVVWQKRVQQARSEPQLLGPGTS
MDRPPCRFHHGPAADRNTDICLYCQTLQHNQGSEEESGV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccccagcggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgggcctggagtccgagcggccggccctccgagcggtcatc
aaggtggcactgctgaatcacgagccgacggggaagcccatcaccctggaaggggtgttc
gtgggaggaagtgccggcttcgcggagggaaaactaatgcagtatcaccctttgtctctg
tgcaacacaagcgaggatgaacgacaagagagtgactttatcaccattgtcaaactggag
cacagggtaccccgctgtctgccgctgctcgataaggctcgcatggcactggacaaaggt
gctcaggctgttatcttcgatgtcagtgatgatgccaatgctgctgctgagctgcgagaa
acagactcccttccccgtccggtcgtgctggtggaggcggaggatgctgaggagctgatg
ggtttggtcaacaagaacgaggaggccaaagttcgcattgagatcatgatggagcagcct
agatggccacactacgatgtgggtatcctgctcaccatcgtcctagctattctcaccatc
atcctaatcttcgctttccgctacaagtgcaagtccaacagaacatgggactctgtccat
cagcagaccatgcgggccattagccgattggagaccaaaacctacaactcccagggttgc
tctggctctcagcgccaccgtgctgcctggggatcagccagcagctccaactcgagcccc
gtttgtgctatctgcctggaagagttccaggacgggcagcatttgaggatcatctcctgt
gctcacgagttccacaaagactgtgtcgacccctggctgctacaacaccgcacctgtcca
ctctgcatgcacaacatcatggggacggagaggcagccccagaggagcagactccagcag
agtcctgagcaaagccagggtttcctgcacgctcagccctacagcagcccgcgcaaccat
cctttcccccagcatgccattcccttttcgatgaggccccactatcctcgtggaccctct
ggaccgtatccctctctgggccactacactagctcttcacccagggacacccaaacacta
cgtttcctcagcaggccgctcggctccggctgtgggtaccaccttcctgtagagggtccc
ggaaggccgcacaggattggaggtaactgcaggacttccacccaacactacaccccccgt
cggtcctgccacaactatcgctcatcctgtccggcccagcgcagtgcctccagctcaaga
ctgcaccacaccacctccgtcgcaccacaatcccgcggagcgccggcacatagccggcag
gatgagggcagctgctcgggtggcagctaccacacggaacgcagtggatacttggctgat
gggccagcaagtgactccagctcagggccgtgccacggctcctccagcgactcggttctc
aattgtactgatgtgtccctgcagggagtttatggcagctggtccactttccgtagctct
ctgagtagtgactatgatccatttgtgtattacgggccaggtcctgggcgcgctcctcgc
aggaatagcctggaggcatgtgcccaggcccggcccaggtctctggattctgtggtgaac
aaagcaggctgccccgaagaacagccgcagactgtgttcaaccacatccactaccaccgc
cacagacaccaccactatgaggagggggagcacagccagggcccgagcagaggctcagac
gaggagcagggggctgctgctgctgctgctgcagctccacctgctgctcttgtcctggac
aaagactcacctgtatgccctcctaagcacagcccctgccagtgcccaaagctagacccc
acagatcggcccggccccgggctagagtgtcaggaccatgaccccgggagcccaacagga
ccttctgtcctggtgtccccaatccccattcagcttcaaccccactgctgccaccaggga
cacggacaccctccggctcctcttgggcgagtgggtggctgtgtgcttgaaggcccctct
gttcgcttccaccagagcttagatctacaggatgaccgtagcatccacatccactacgga
cagggtccgggcttctgctgctctcctcctgagctgcaccctgccttgctacccgtacct
ctcattctggactctggaggtatggaggactggccttgctgtgccggggcccatgttgtg
tggcaaaagcgggtgcagcaggcccgctcggagcctcagctactgggtccggggacctct
atggacaggccgccctgcaggttccaccacggccctgctgctgaccgtaacacagacatt
tgtttgtactgccaaacattacaacacaatcagggatcagaagaggagtctggtgtgtga
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