Larimichthys crocea (large yellow croaker): 109137633
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Entry
109137633 CDS
T04659
Symbol
aff2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
109137633 (aff2)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109137633 (aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
109137633
NCBI-ProteinID:
XP_027136707
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All DBs
Position
I:complement(42872552..43014015)
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AA seq
1548 aa
AA seq
DB search
MSSGVGAQRPEEEGVGEEDQEVPTDEDLFSTGFNLFGEPYKTNKGDALASRVQNTLGSYE
EMKDLLTSHSNQSHLVGIPKGSNNLQTPTTSTTERPAMEPQLFTEALRGGTGGGGGGGGA
DGGGEKRMGNASSSSSTSMQPPASATSSSSATTISHQNSKKSRSSMDWSRAGHGQSTQGT
GLVLGLGQNSQGQVTAATSGRGKMSLLEEQRHEELFSSLKDELGLKGDSSPSSSSSSSSS
SSSSSRRRHSSHPSKTLPLPDGGNFRSSTMDGGHFKPASNTENGGHFKTSPFENETGSHL
STSSSPLASTSVLTTPTPGLTTPTSGLTTPTFPPGSLSGKPIAVQQKPTAYVRPMDGQDQ
VPSDSPQLKPPLVATEGFNNSQTYGGNSGNVKNKLPKLSLSHAGEVSLPNDSSCVEEILR
EMTHSWPPPLTAIHTPGKADQTKFPIPNKESQHVTSGYNTQKRCTVSANKPAAKPPTAPQ
KSMLEDDLKISSDEEEAEQKVSDKPKARGTALSGASGSSSESESSSESDTDESESSSSDS
EYNQASRTNTPEPEPPSTNKWQLDSWLNKVQAQTKPLVPPQQEHHGKGSITQGQETFCPG
NEAPGVGTAAKTKPCGSSTTTVPAAPTVEHKDTRGALCPGKEKAKAKISQKASGESQRSK
MRLSPGLVAGPEVTTPRRNTTGKKQPRRTDRSNSVEDNQNQTWSRANQHSPAAREKDLLP
PPSLEHQNPLRPRSKPPSGKTAPRKEPRSATNSNNNTVTPPAALQQTPVPIPAVSANQDK
RKHRGPNTKITPKSREFIETDSSSSSSECQSDSEEVIKIPALPPQTTRAAINTQTLSSTH
IHTPLLPCLASAGSMGSLGTFGGKGLRVKDSSNVTTNGSSSSNSSMIGGSNGSTSNCNTL
SISNISGSFGTSVPDPGGLGGQCKDLEPMSPPSNIGHEVPLSPLRDYQEIQSLWVKIDLS
LLSRVPSQGLGERSRVGIAERDGSEGRDRERMGVAERERQKQEEREWPGLRERQKFTKGD
KQEEENERLVQDRERQGDRDRLTERERQTDREDRERFGLGERERTTGRDREKVCQGLGVL
DNPPVQEQSNPRLAGRTEKGENGGKHRRQAAGNIVVPTEKHTSKSKRKHKSDHSESSVNG
NKKLRLDKSCQLLPPCISPIHNHKNSSTDSSLNRKQSRRRDEKLLPPLLSPLSDDPPRKR
TCDSSSSLSQEGGSATGMLPCSTSSTTSASSSSHRHRRGEGKASSHVRNGSEMDPHGEKP
SGDGYHANGQSDSEVWSEPVTEPAEPRRPRLSFSDTVHSADYYMQEAKRLKHKADALMDK
FGKAVNYADGALSFIECGNAMERDPLEAKSPYTMYSETVELIRYAMRLKNFTSHSATVAE
KKLAVLCNRCLSLLYLRMFHLKKDHAVKYSRSLMEYFKNSAKSSHQAPSPWRTNGKVNGT
PSPLSLSPSPASGGGGGGGSGGAPASSGSVAIPQRIHHMAASHVNITNNILRSYEHWETA
DRLATDSNEFFQELDSVMEPLSQQSSMTELVRYIRQGLHWLRIEAHLL
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctggagtcggagcgcagcgtcctgaagaggagggagtgggagaggaggaccag
gaggtcccaacagatgaagatctcttctcaactggattcaacctgtttggagaaccttat
aaaactaataaaggtgatgcgttggcgagtcgtgtccagaacacgctgggctcctacgaa
gaaatgaaagatctgttaaccagccactctaaccagagccacttggtgggaatccccaaa
ggcagcaacaacctgcagactccgaccacctcaacgacggagagacccgccatggagccc
cagctcttcaccgaagccttgaggggaggtacaggtggaggaggaggaggaggaggtgca
gacggaggtggggaaaaaaggatgggaaatgcatcttcctcatcttcaacttccatgcaa
cctcctgcttcggctacttcgtcatcgagcgccacaacgatctcacatcagaattctaaa
aagtccagaagctccatggactggtcaagggcaggtcatggacagagcacccaaggaaca
ggcctcgtactggggttaggacagaacagtcaagggcaggtcacagcagctacgagcggg
agagggaaaatgtctttattagaggaacagaggcatgaagagctgtttagctcacttaaa
gatgaacttggtctaaaaggagactcaagcccttcttcttcctcctcatcctcctcttct
tcttcatcttcttctcggagaaggcactcttcccacccctccaaaacacttcctctccca
gatggtggtaattttcgatcttccaccatggacggtggtcattttaagcctgcatctaac
acagaaaatggcggacatttcaaaacgtccccgtttgaaaatgagaccggttctcacctg
tcgacatcctcgtccccactggcttccacgtcagttttgacgacgcctactcctggtcta
accactcccacgtctggactgactacccccaccttcccacctggtagcctatcagggaag
ccgattgcagtgcagcagaagcccacagcatatgttcgaccaatggatggccaggaccag
gtgcctagtgactctccgcaacttaaaccccctctagtggccacagagggatttaacaac
agtcagacttacggcggaaactccgggaacgtgaagaataaactgcccaaactgagtctc
agccatgcaggcgaggtcagcctaccaaatgactccagctgtgttgaggagattttgcgg
gagatgacgcactcctggcctcctcctctcacagccatacacactcccgggaaggctgat
cagaccaagttccctatcccaaacaaggagtcacaacatgtgacctcgggctacaacacc
cagaagcgatgcactgtatcagctaacaagcctgctgctaaaccaccaactgcaccacag
aagtcaatgttggaggatgacctgaagatcagcagcgacgaggaagaggccgaacaaaag
gtgtctgacaagcccaaagccagaggcacagcgctaagcggggcatcggggagcagcagc
gaatcagagagcagctcggagtcggacacagacgagtcagagagcagctccagtgacagc
gagtataatcaggcgtcccgcaccaacactccagagcctgagccaccctccaccaacaag
tggcagctggacagctggttgaacaaggtccaagctcaaaccaaacccctggtcccccca
cagcaagagcaccatggcaagggctccattacccagggtcaggagactttctgtccaggg
aacgaagcaccaggagtgggtacggctgccaagaccaagccttgcggatccagcaccacc
accgttccagctgcaccaacggtggaacacaaggatacaaggggagccttatgcccaggc
aaagagaaggccaaggccaagatcagccagaaggcctcgggggagagccagaggtcaaag
atgaggctatcaccgggtctagtggctgggccagaggtcacgaccccaaggaggaacacc
acagggaagaaacagcccagacggacagaccgatcaaacagtgtggaagataatcagaac
cagacatggagcagagcaaaccagcatagccctgcagcgagggagaaggacctgttgccg
cctccctccctggagcatcagaaccccctgaggccacgaagcaaaccccccagtgggaaa
acagcccctaggaaagaacctcgcagcgctaccaactcaaacaacaacacagtaactcca
ccagcggcgctacagcaaacccctgtgccaatacctgctgttagtgcaaaccaggacaag
aggaaacaccgaggtccaaacaccaaaatcacacccaagtcccgagaattcatcgagaca
gattcttcctcctcctcctctgaatgccaatcggattcggaggaagtcatcaaaatccca
gctctaccgcctcagacgacacgcgccgcaattaacacacagactctgtccagcacacac
atacacacgcctcttctgccatgcctcgcctccgctggcagcatgggcagtctgggaaca
tttggagggaaggggcttcgagtcaaagacagtagcaatgtgaccactaacggtagcagc
agtagtaatagtagcatgatcggtggtagtaatggcagcactagcaattgtaatacacta
agcattagcaacataagtggttcatttggcacttctgttcctgatcctggagggttaggg
gggcagtgcaaagaccttgagcccatgtcaccaccttccaacattggacacgaggttcct
ctctctcccctgagggactaccaagagattcagagtttatgggtgaaaattgacctgagt
ttgctcagcagggtgcccagtcagggtttgggggagagatcaagggtgggaatagcagaa
agggacgggagtgaggggagagacagggagaggatgggggtggcggagagagaaagacag
aagcaggaagagagagagtggccagggctgagagagagacagaaattcaccaaaggggac
aaacaggaagaagaaaatgagcgattagtgcaggacagagagaggcaaggtgacagagac
agattaacagagagagagaggcagacggacagagaggacagagaacgatttgggctcggg
gagagggaaaggacaacgggcagggacagagagaaggtatgccaaggtctgggggtcctg
gataacccccctgtgcaagagcagagtaatcccaggctggccgggaggacggagaaagga
gagaatggaggcaaacacaggaggcaggcagctggaaacatagtggtcccaacagagaaa
cacaccagcaagagcaagaggaaacataagtcggaccacagtgagtcatcggtcaacggc
aataagaagctgcgactggacaagagctgtcagctcctcccaccgtgcatctctccaata
cacaaccacaagaacagctccacagacagctctctaaacaggaagcagtctcgacggcgg
gacgagaagctgctcccgcccctcctgtcccccctctctgacgatccccctcgtaaacga
acctgcgacagcagttcctctctcagccaggagggcggcagcgccaccgggatgctgccc
tgctccacctcttcgaccacctccgcatcctcttcctcacacagacacaggagaggcgaa
ggcaaggcctcgtcacatgtgagaaatggcagcgaaatggatccccacggcgagaagccc
agtggagacggttaccatgccaacggacagtccgactcggaggtgtggtccgaaccggtg
acggaacccgccgaacctcgcaggccaaggctgtcgtttagcgacacagtccacagtgca
gactactacatgcaggaggccaagagactgaagcacaaggccgacgctttgatggacaaa
tttggcaaagcggtgaactacgcagacggcgccctctccttcatagagtgtggaaatgcc
atggagcgagatccgcttgaggccaaatcaccatacaccatgtactccgagaccgttgag
cttatcaggtatgccatgaggttgaagaacttcaccagccattcagccaccgtcgctgag
aagaagctagcggtgttatgtaaccgctgtctgtctctgctgtatctgaggatgttccat
ctgaagaaagaccacgctgtcaagtactcgcggtcgctcatggagtacttcaagaattcg
gccaagagttcacaccaagcaccctctccctggaggaccaatgggaaggtcaatgggact
ccatctcccctctcacttagcccttccccggccagcggcggcggcggaggaggtggatct
gggggtgcccccgcctcatcgggaagtgtggctattccccaacggattcaccacatggct
gccagtcatgtgaacatcaccaacaacatcctgcggagctatgaacactgggagacggct
gacagactggccactgatagcaacgaattcttccaggagctggactcggtgatggagccg
ttgagtcagcagagcagcatgactgagctggtccgatacatcagacagggactgcactgg
ctccgcatagaggctcacctgctgtaa
DBGET
integrated database retrieval system
