Larimichthys crocea (large yellow croaker): 109138101
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Entry
109138101 CDS
T04659
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
109138101
Transcription factors [BR:
lco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109138101
BRITE hierarchy
SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109138101
NCBI-ProteinID:
XP_019112906
UniProt:
A0A0F8AFQ3
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All DBs
Position
XI:23551158..23556624
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AA seq
307 aa
AA seq
DB search
MYSMMEHELKPVGQPQSHQTSQGMSPVTGNMTGNMGGNANSHPNSKTACAPGGDPMDKVK
RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHM
KEYPDYKYKPRRKTKPLLKKDTQVGKYPLSAGNLLAAAAQGQGGSPRMESYGWGPTGGYA
GMQGEALGYTQQLHRYDLSALQYPPAMTAAQTYMNGANSYSPMSYSSSPQQPSPVTMSMV
KAEPVSHSPPTGTPNHHRGPLQGDLRDMISMYIPGPGGDAGDPTTAQRGYTSVQQHYLTG
TVPLTHI
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacacgagctgaagccggtcggccagccccagtctcatcagacg
tcccagggaatgtcaccggtcaccggcaacatgaccgggaacatgggcggcaatgcaaac
tctcacccgaattccaaaacggcgtgcgcacccggaggcgaccccatggataaagtgaag
cgacccatgaatgcttttatggtgtggtccagaggacagaggcgtaagatggctcaagaa
aaccccaaaatgcacaactccgagatcagcaagcggctgggagcggagtggaagctcctc
acggacgccgagaagcggcccttcattgacgaggccaagcggctccgggcggtccacatg
aaggagtaccccgactacaagtacaagccacgccgcaagacgaagcccctgctcaaaaag
gacactcaggtgggcaagtacccgctctccgcggggaacctgctggcggcggcggcgcaa
ggccaaggtgggagtccgaggatggagagctacggctggggtcccaccggggggtacgcc
ggcatgcagggcgaggcgctcggctacacacagcagctccaccggtatgatctatcagct
ctgcagtatccacctgcgatgacggcggcgcagacatacatgaacggagccaactcgtac
agccccatgtcatacagcagcagtccccagcagccaagccctgtcaccatgtccatggtc
aaagcagaaccagtgtcccactctcctccaacggggacaccaaaccaccaccggggccct
ttgcagggtgacctcagggacatgatcagcatgtacattcctggaccaggaggggatgcg
ggcgaccccacgacagcacagagaggctacactagtgtccagcagcactacctcactgga
accgttccactcactcacatctag
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integrated database retrieval system
