Larimichthys crocea (large yellow croaker): 109138259
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Entry
109138259 CDS
T04659
Name
(RefSeq) integrin alpha-M-like isoform X1
KO
K06461
integrin alpha M
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04145
Phagosome
lco04514
Cell adhesion molecules
lco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109138259
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109138259
09142 Cell motility
04810 Regulation of actin cytoskeleton
109138259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
109138259
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
109138259
04515 Cell adhesion molecules [BR:
lco04515
]
109138259
04090 CD molecules [BR:
lco04090
]
109138259
00536 Glycosaminoglycan binding proteins [BR:
lco00536
]
109138259
Membrane trafficking [BR:
lco04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
109138259
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109138259
Cell adhesion molecules [BR:
lco04515
]
Integrins
Integrin alpha subunits
109138259
CD molecules [BR:
lco04090
]
Proteins
109138259
Glycosaminoglycan binding proteins [BR:
lco00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
109138259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ITGAX-like_Ig_3
RUS6_N
Motif
Other DBs
NCBI-GeneID:
109138259
NCBI-ProteinID:
XP_027145041
LinkDB
All DBs
Position
XVI:8223377..8236313
Genome browser
AA seq
1136 aa
AA seq
DB search
MDRIITTIVFLSVLKAALCFNIDPVAWKSLSNDAAGFGYQVVQRSSDLLVSAPLEQFAPN
GRGQIYKCSTTSCQKLSVPQPDFAVNMSLGLTMTSDPITQNTMACGPTIPKDCQSITMYN
GVCFNIDRSDHVGSAVPSSLPECQIEADIAFLLDGSGSVNSNDFQRMKVFVKDLVRSFVG
QDTQFAISQFSTGFKVHYYFNTFSTQNWQGQIDGIRQLGGWTYTANAIKRVVQDVFSPYR
GARPKVKRVLIVITDGESNDRNDLRGASNLAGNAKIVRFAIGVGSAFDKTDAKEELKTIA
SSPPDEHVFQVGNFGALETIRNNLQEKIFSIEGSQTDGESLKLEMSQEGFSAAYVPKGFQ
MGIVGANQWKGGYMKYTSSGMKSGSYEPLNVESDSYLGYSMAVANTRQGSMTIVGAPRYQ
HRGVVMAVDPSGNFKKIDPFPWQFQSGEYFGAEVCTMDVDRDTYTDLIFISAPMYMDTDR
EGRVYVCSLSVLNVDCHLDSPFVLRGEASDRGRFGSSLAVLPDLNTDGLNDLAVGAPLED
DGQGSIYIFHGEPGGRISRLHTQRIAGSKVQSGLKFFGMSISQSSFDLSQDLLPDLAVGS
KGKVILLRSKPIVLVEATVSFSPSQIPTQKGDCSQPLRTKAEICFTMTKRSSVDQASARI
NCNFTLDSTRKAPNNRAYISEKQRMTNKSVDLDLRQPKCFDVNFFVEPCPEDALNVLSNE
LTFTFEGLPSEILNLSPSLALKAQTTTFHPLGFEINCGTDNNCVDNLKVDFNFTTSLEVK
VGIDELLDVTVSVENSEENSYNSRVIVTYPAGLSFRKFTILQGRIECNSLDSEGLSEGRT
DCTIDKPIFKTNTKAFFIISYGIETNSQLDKMIFITANATSGNNEHSVSSELYKQKSIPV
KYSIFVTFESTLSYNNFTFGKDDLEKPVQQSIVVTNDIRTLNFTVVIRVPVKLGDKDIWA
DSSSLQFPDCQRDKDEEPLVKDFVAQIQKNKLVDCSVAQCRVFKCNMFMGRLERKTLKIS
ANLSSRWIQQIGLKSAKYLLTSTASLEYDRNQYIFFSTGSNNNPPIRKIEAEVEVYSEPD
FTKEIVGGSLGGLALLALLTAGLYKAGFFKSKYNDMINADEADPGDDGEPEQTPEA
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggacaggataattaccactattgtattcttgtcagtgttaaaagctgcactttgtttt
aatatcgaccccgtggcttggaagtccctcagtaatgatgctgcaggttttggataccag
gtggtgcagagatcatcagatttgctggtcagtgctcctcttgaacagtttgcaccgaat
ggaaggggtcaaatatataaatgttctaccacatcctgtcaaaaactttcagttccacag
ccagactttgcagtcaacatgtcccttggtttgacaatgacaagtgatcctatcacacaa
aacaccatggcatgtggaccaaccatcccaaaggactgtcagagtattaccatgtacaat
ggtgtatgctttaacatagaccgttctgatcatgttggaagtgctgtgccatcttctctt
ccagagtgtcaaattgaagctgacattgcatttctgttggatggctcaggcagcgtaaat
tcaaatgattttcaaagaatgaaggtgtttgtgaaagatctggttagatcgttcgttgga
caagacacacagtttgccatttcccagttctccacaggattcaaagtccattactatttt
aatacatttagcactcaaaattggcaaggacaaattgatggaatacgtcagttaggtgga
tggacttacacagcaaatgccatcaaacgtgttgtccaagatgtcttctcaccatatcgt
ggtgccaggccaaaagtcaagagggttttaatagtcattacagatggagagtctaatgat
cggaatgatttgcgaggtgcatcaaatttagcaggaaatgcaaagattgttcgatttgct
attggggtggggagtgcatttgataaaaccgatgcaaaagaggaactgaaaaccattgca
tcttctcccccagacgaacatgtgtttcaagtggggaactttggtgcacttgaaacaata
agaaacaatttgcaggaaaaaatcttttccattgaaggatctcaaacagatggagagtca
ctgaaattggaaatgtctcaggagggattcagtgcagcttatgtgcccaagggatttcaa
atgggtattgttggtgccaaccagtggaagggaggctacatgaaatacacaagctcaggc
atgaagagtggctcttatgagcctttgaatgtggagtctgacagctatctgggttactcc
atggcagttgctaacacgaggcaaggctcgatgacaattgttggtgctccaagatatcaa
cacagaggagttgtgatggcagttgatccaagcggcaatttcaaaaagattgatcccttt
ccatggcagtttcagagtggtgaatattttggggcagaggtttgtaccatggatgtggat
cgtgacacctacactgacctaatcttcatatctgcccctatgtatatggacactgacaga
gaaggaagagtttacgtttgcagcttaagtgttttgaatgtcgactgtcacttagattct
ccatttgtactaagaggggaagcatctgacagaggaaggtttgggtcttctcttgctgtt
ctgcctgatcttaacacagatggtcttaatgatttggccgttggagcacctttggaggat
gatggtcaaggcagcatttacatattccacggtgaaccaggaggaagaatcagtcgtcta
catacccagagaattgctggatctaaagtccagtcaggactgaagttcttcgggatgtcg
atcagtcagtcatcttttgacctgagtcaagaccttctgcctgacttagcggtgggttca
aagggtaaagttattttactcagatcaaagcctatcgtattggtggaagctacagtgtct
ttcagcccaagtcaaatccctactcaaaagggagactgctcacaaccattgaggaccaaa
gctgaaatctgttttaccatgaccaaacgctcttcagtagaccaagcaagtgcaagaatc
aactgtaattttacactggattccacccgtaaggccccaaacaaccgagcttacatcagt
gagaaacaacgaatgacaaacaaatcagttgatcttgacttacgacagccaaagtgcttt
gatgtgaacttctttgttgagccttgtcctgaagatgctctcaatgtactgtccaatgaa
ctcacattcacctttgagggtttgccttctgaaatattaaatctcagcccaagtctcgcc
ctgaaggctcagacaactacttttcatcctttagggttcgaaatcaactgcggcactgac
aataattgtgtggataatctgaaagtggatttcaacttcactacatccttagaggttaaa
gtgggcattgatgaactgttggatgtcaccgtgtcagtggagaacagcgaggaaaactcc
tacaacagccgtgtcattgtcacatacccagccgggctctcctttagaaagttcacgatt
ctgcagggaagaattgagtgcaactccttggacagtgaaggcttgtcggaaggaaggact
gactgcactattgacaagccaattttcaagaccaacaccaaggctttcttcatcatctcc
tatgggattgaaaccaatagtcaacttgacaaaatgatttttatcactgcaaatgcaacc
agtgggaacaacgagcactcagtgtcaagcgaactctacaaacagaaatcaattcctgtg
aagtacagcatttttgttacatttgaaagtactctcagctacaacaatttcactttcggg
aaggatgatttggagaaaccagtccaacaatcaattgtggtcacaaatgatatcagaaca
ctgaatttcactgtggtgatcagggtgccagtaaagctcggtgataaagacatctgggcg
gattcaagcagtttgcagtttccagactgccaaagagacaaagatgaagaaccactggtc
aaagattttgttgctcagatacagaaaaataaattagtggactgctctgtagcccagtgc
agagtgttcaagtgcaatatgttcatgggaagactggagaggaaaactctcaaaatctct
gccaaccttagctcacgatggatacagcagattggacttaaatctgccaagtatctcttg
accagcactgccagtctggagtacgacagaaaccagtacatcttcttttcaacagggtct
aataacaacccacccattcgcaagattgaggcagaggtggaagtgtattctgaaccagac
ttcaccaaagagattgttggaggatccctgggagggttggctctactggctttactgacc
gcaggcctgtataaggctggattcttcaagagtaaatacaacgacatgatcaatgctgat
gaagcagatccaggggatgatggtgaacccgaacaaacaccagaagcataa
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