KEGG   Larimichthys crocea (large yellow croaker): 109138525
Entry
109138525         CDS       T04659                                 
Symbol
yod1
Name
(RefSeq) ubiquitin thioesterase OTU1
  KO
K13719  ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109138525 (yod1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lco01002]
    109138525 (yod1)
Peptidases and inhibitors [BR:lco01002]
 Cysteine peptidases
  Family C88
   109138525 (yod1)
SSDB
Motif
Pfam: zf-C2H2_OTU1_C OTU1_UBXL OTU Ubiquitin_2 ubiquitin UBL_USP40 Phage_ProQ_C_like
Other DBs
NCBI-GeneID: 109138525
NCBI-ProteinID: XP_019114425
UniProt: A0A0F8AWI9
LinkDB
Position
VI:8101725..8106827
AA seq 301 aa
MLRLRCKTKNGSHIMQGLTHQSCVQELKSKVEELTGIPCDVQKIMVGYPPSSLDLRNGDA
HLKDYPIKSGDTLIVEEEKNKPKPQDHPTVTKVPRLEASPVLARRVVPADNSCLFTSVYY
VVEGGVYDPACAPEMRGLIAQIVSSDPAAYSEAVLGKTNEEYCTWIRRDDTWGGAIEVSI
LSKFYQCEICVVDTQTVRVDRFGEDAGYHKRVLLIYDGIHYDPLQKETPGSDVPPLTIFS
TTDDVILAQALELADEARRKRQFTDVNRFALRCMVCQTGLVGQKEAREHAKETGHTNFGE
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgttgaggcttcgctgtaagaccaaaaacgggagccacataatgcagggcttgactcat
cagtcctgtgtacaagagctgaagagtaaggtggaggagctgactggcatcccctgtgac
gtgcagaaaattatggttggttatccgccctccagccttgaccttcgaaatggagacgct
cacctcaaggattaccccatcaaatcaggagacacactcattgttgaggaggaaaaaaac
aagccaaagcctcaggatcatcccactgtgactaaagtaccacgcctggaagcctcacct
gtgctggcacgccgtgttgtcccagctgataactcctgcctcttcaccagtgtgtattat
gtggtggaaggtggtgtatatgaccccgcttgcgccccagagatgcgaggcctcattgcc
cagattgtgtcaagtgaccctgcggcttactcggaagcggtgctgggaaagaccaacgag
gagtactgcacttggatacgacgtgacgacacctggggaggcgccatcgaggtgtctatc
ctgtctaagttttaccagtgcgagatctgcgtggtagacactcagacggtccgagtggat
cgctttggggaggacgccggctaccacaaacgcgtgctgctcatttacgacggcatccat
tatgacccgctgcagaaagaaactcctggctctgacgtcccgcccctgactatcttctcc
actacagatgatgtaatcctggcccaggccctcgagctggcagacgaggctcgtcgcaag
cggcagttcacggacgttaaccgctttgcgttgcgctgcatggtgtgccagacgggctta
gtgggacaaaaggaagctcgtgagcatgccaaggagacaggccacaccaattttggcgaa
gtgtga

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