Larimichthys crocea (large yellow croaker): 109138681
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Entry
109138681 CDS
T04659
Name
(RefSeq) zinc finger BED domain-containing protein 1 isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
109138681
04121 Ubiquitin system [BR:
lco04121
]
109138681
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
109138681
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109138681
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
DBD_Tnp_Hermes
Microp_apicomplexa
Motif
Other DBs
NCBI-GeneID:
109138681
NCBI-ProteinID:
XP_019115225
UniProt:
A0A0F8ASK1
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Position
XIX:11608490..11611632
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AA seq
592 aa
AA seq
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MKRAKRSAVWDHFNIVNGGKEVKCSLCNAVLKYNSSTSSLSYHLNTTHAALLHGASSPAQ
PTITATLGRRVCDERRAEGITEKICSMIERDLMPINTVDGAGFQDLIAFIEPGYKIPSRP
SVTSRVEARFEKKKSELKTKLATATGVALTTDCWTALTTESYITVTCHYFNAKWELKSAV
LTTTSMSDRHTADNLAEKLNDIVETWGLSGRVTACVHDNARNIVLANNPTRVSWKSVACY
AHTLNLAVNDGFAAAGISRAIVAAGRLVKHFHHSTIATKALEEKQEQMSLPPHRLIQSCK
TRWNSVCDMFDRLVEQRWAVSAVLSDRSVTKLADARTLELRDDYWQLMEDIAPVLGTLKC
ATTVMSAESEVSISNTYPITFSLINKHLGASDEDSHKVADFKEKVRDCLGERMKIKSDDL
YLSTPMVATMLDPRHKHLGFLPPATRRSAHSTLLQMATAERDSVTATGAATAGDDTVQTA
GPRRHGAKPTSAMSLLLGETYSDARKGDVESEVDMYLKDAPAPLESNPTCWWKVNEGRFP
TLATLAKRYLCTPGTSVPSERVFSAAGLTVNRLRTRLTPEHVNMLIFLNKNI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggcgaaaagaagtgcggtatgggaccacttcaacatagtaaatggaggcaaa
gaagttaaatgttcgctgtgcaatgcggtgttgaagtataacagctccaccagctcactg
agttatcatttgaacaccacgcatgctgctctcctgcatggcgccagttcacctgctcaa
cctacaatcacagctacactgggaaggcgagtgtgtgatgagagaagggcggagggcatt
acagagaagatttgcagcatgatcgagagagatttgatgccaatcaacacagtggacggt
gcaggatttcaagatctcattgcgttcatagagccaggttacaaaatcccttcgaggcca
tcagttacatctcgcgtcgaagctcgcttcgaaaaaaagaaaagtgagctaaaaacaaag
cttgctactgctacaggggtagccttgacaactgactgttggacggcgctaacaacggaa
agttacattacagttacgtgccactactttaatgcaaaatgggagctgaaatctgcagtc
ctgacaacgacgagcatgtccgacagacacaccgccgacaacttagcagaaaagcttaat
gacattgtggagacgtggggactttccggtcgcgttacggcgtgtgtgcacgacaatgct
agaaacatagtcttagcaaacaatcccacaagagtcagctggaaatcagtggcgtgttac
gcacacacactaaacctcgctgtcaatgatggttttgctgccgctgggatcagcagagct
atagtggcagcaggaaggttggtaaaacatttccaccacagcacaatcgcaaccaaagct
ctggaagaaaaacaagagcaaatgtcactccctccgcatcgcctcattcaatcatgtaaa
actaggtggaattcggtctgcgacatgtttgaccgcctagtcgaacagcgatgggctgtg
tcagcagtgctatcagaccgttccgtgacaaaactggcagatgcgaggacgctggagttg
agagacgactactggcagctaatggaagatattgcacccgtgttgggaactttgaagtgt
gcaacaacggtgatgtctgccgagtcggaggtgtcaatctcgaacacgtaccccatcacg
ttcagtctaatcaacaagcacctcggcgcttcagacgaggacagccacaaagtcgcagac
ttcaaggaaaaagtgcgagattgtctgggcgagcgcatgaagattaagtctgatgacctc
tacttatccacccctatggtcgcaactatgcttgaccctcgtcacaaacacctgggattt
ctacctccagctaccaggaggtcagctcattccacactgcttcagatggctacagctgaa
cgcgacagcgtcacagcaacaggtgccgccaccgctggagatgacactgtccagacagca
gggcctcggcgacatggggctaagcctacatctgctatgagtttactcctgggtgaaacc
tattccgatgcccgcaaaggtgacgtggagagtgaagtggatatgtacttaaaggacgct
cctgcccctcttgagtcgaaccccacatgctggtggaaagtgaatgaagggaggtttccg
acgctggcaacactagcaaaacggtatttgtgtacgccaggcacatcagtcccttctgag
cgtgtattttcagcagctggcctcactgtaaataggctgcgcacacgccttacccctgag
catgttaacatgctcattttcttgaacaaaaatatatag
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