KEGG   Larimichthys crocea (large yellow croaker): 109138725
Entry
109138725         CDS       T04659                                 
Symbol
atg5
Name
(RefSeq) autophagy protein 5
  KO
K08339  autophagy-related protein 5
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04136  Autophagy - other
lco04140  Autophagy - animal
lco04216  Ferroptosis
lco04621  NOD-like receptor signaling pathway
lco04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:lco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    109138725 (atg5)
   04136 Autophagy - other
    109138725 (atg5)
  09143 Cell growth and death
   04216 Ferroptosis
    109138725 (atg5)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    109138725 (atg5)
   04622 RIG-I-like receptor signaling pathway
    109138725 (atg5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lco04131]
    109138725 (atg5)
   03029 Mitochondrial biogenesis [BR:lco03029]
    109138725 (atg5)
Membrane trafficking [BR:lco04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    109138725 (atg5)
Mitochondrial biogenesis [BR:lco03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    109138725 (atg5)
SSDB
Motif
Pfam: ATG5_UblA ATG5_UblB ATG5_HBR Peptidase_M99 DUF6782
Other DBs
NCBI-GeneID: 109138725
NCBI-ProteinID: XP_027142857
LinkDB
Position
XIII:36193736..36227560
AA seq 275 aa
MADDKDVLRDVWFGRIPTCFTLNQDEVTEREAEPYYLLLPRVSYLTLVTDKVKKHFLKVM
KAEDVEEMWFEYEGTPLKWHYPIGVLFDLHASNTVLPWSITVHFKNFPDRDLLHCPSSSV
IEAHFMSSIKEADALKHKSQVVNDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYSTEDG
GFRYIPFRIYQTMSDRPFIQKLFRPVSPEGNVHTLGDLLKEMYPTALPNDGEPKRYQVVI
HGIEPLLETPLQWLSEHLSHPDNFLHICIIPTPTD
NT seq 828 nt   +upstreamnt  +downstreamnt
atggcagatgacaaggacgtgttgagagacgtttggtttggtcggatccccacctgcttc
accctgaaccaggatgaggttacagagagagaggctgagccttactatctgcttttaccc
agggtgagctacctgactctggtcacagacaaagtgaagaaacacttcctcaaagtgatg
aaggcagaggacgtggaggagatgtggttcgagtacgaagggacgccgctgaaatggcac
tatccaatcggagttctgttcgacctccatgcctccaacaccgtcttaccctggagtatc
actgtgcactttaagaattttccagaccgtgacctgctccactgcccgtccagctccgtt
atcgaggctcacttcatgtccagcatcaaggaggccgacgccctcaagcacaagagccaa
gtcgtcaatgacatgcagaagaaagaccacaagcagctgtggatgggcctgcagaacgat
aagtttgaccagttctgggccatgaacaggaagctgatggagtattccaccgaggacgga
ggctttagatacatccccttcaggatataccagacgatgagtgacaggccattcatccag
aagctgtttcgcccggtttcacctgaaggcaacgtgcacacactcggcgacctgctgaaa
gagatgtacccgactgctttaccaaacgacggtgagccgaagcgttaccaggtggtgatc
cacggcatcgagcctctgctcgagactcctctgcagtggctcagcgaacacctcagccac
cctgacaacttcctgcacatctgtatcatcccgacccccaccgactga

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