Larimichthys crocea (large yellow croaker): 109138765
Help
Entry
109138765 CDS
T04659
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
109138765
Transcription factors [BR:
lco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109138765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_9
PAS_4
PAS_2
HLH
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
109138765
NCBI-ProteinID:
XP_019115599
LinkDB
All DBs
Position
III:9865396..9870781
Genome browser
AA seq
780 aa
AA seq
DB search
MTIWCNSCKCHVSAPCTSHHLPADHRSSFCRRLRSTKGASKARRDHINHEIRNMRALLPI
TQEDQERLSYLHSMAAICTYVRKSVLFQGLPAEERSHCSLPYEAFLQALHGFILITTAQG
RLVYVSENVAEYLGLSMIDVLQGDTFYDMVESSDIAIVKSNLDIENNSSSERSFICCMQT
SKAFKLQHGSCCSMMVTGSFQSFPQPLSTSSVCPTNQPLFVALCTPTVNRLRSSDSDFCH
SFNSVHRLDMTYTHLSDSALYFLGYSAEEMTGRSWYSLVHTEDLSLSADSHRSLLQADDG
FQVEIVLRLQCKDLSWTWIYIQANKDSECQGISCTNFIISETEARFLQKKISSDAFRPSS
LANSCNFAAQQAPSTQSYNNTKCLKRQRTSSSQSEELPSARLRRESEQDLYNVACTSSQG
NSSPVPLGDSPAFFTPPYSPASSSSTLQQDELSHDLLMDVHGYTDQLLSSPKGSPSYYSY
PEAGLTCHQSPSDSLPISLPAAAEQTFDQTAFGALSAHSPLSSSSPTYDFQACTSDARLV
PDCLSVSNMCESPVDCALHQDDFSLLEQPQEGSLVQAQHVPHHMLSLHSSLLTPNQSPTP
TDSNTYSETEQAEISILAQQISSLASSFAMYHTLNPLQNAIQPATINTLPTACDWPHHPP
LSSVLPLKRELPLDDNVFDSILKDLDMATWKRNLSTPGVVPYSYQQGLLHSRNGSHQLDQ
DALGLTPSIPEGPLPTEQFTVMDAFNLQLERHGQNTGLHQLNHYMQSGLQQDGLAEENLY
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgactatttggtgcaactcctgcaaatgtcatgtaagtgccccgtgcacctctcatcat
ctgcccgcggatcaccgcagctccttctgcaggaggctcagatctaccaaaggagcgtct
aaagcccggcgggaccacatcaatcatgagatcaggaatatgcgcgccctgttgcccatc
acccaggaggaccaggagcgactctcctacctgcactccatggccgccatctgcacctac
gtcaggaagtctgttctcttccagggactcccagctgaggagagatcacactgctcactg
ccatacgaggcctttcttcaagccctgcacggcttcattctgataacaactgcccagggg
aggctggtctatgtgtcagaaaatgtagctgaatatcttggtctttccatgatagatgtg
ctccaaggggacactttctatgacatggtggaaagctctgacattgctattgttaaatca
aacctggacattgaaaacaactcatcatcagagaggagctttatatgttgcatgcaaacc
tccaaggccttcaagctgcaacacggcagctgctgttccatgatggtcacagggagcttc
cagtcttttcctcagcctttgtccacctcttcagtctgtcccaccaaccagcctctgttt
gtggccctctgtacccccacagtcaaccgcctgcggagctctgactccgacttctgtcac
agcttcaacagtgtccacagactggatatgacttatactcacctgtcggacagtgcttta
tattttttggggtattcggcagaagagatgaccggacggtcgtggtacagtctcgtccac
actgaagatctttctctgagcgcagattctcatagaagtttattgcaggcagatgatggc
ttccaggtagagatagtgctaagactccagtgcaaggatctgtcatggacctggatctac
attcaagctaacaaagactctgagtgtcagggcataagctgcacaaacttcatcatcagt
gaaacagaagccaggtttctgcagaagaaaatcagcagtgatgctttcagaccatcatct
ctggcaaattcctgcaattttgcagctcaacaggctcccagtactcagagctacaacaac
actaaatgcttgaaaaggcagaggacatctagcagccaaagtgaggagcttccaagtgcc
agacttaggagggagtctgaacaagacttatacaatgtggcgtgcacatcctctcaaggc
aatagctcacctgttcccttaggtgacagccctgctttcttcacccctccctacagccca
gcctcttccagttccactctgcagcaggatgagctcagccatgacctcctgatggatgtg
catggatacacagatcagctgctgtcctctcccaagggctctccctcctattattcttac
ccagaggcagggctcacctgtcaccaatctccctccgattccctcccaatctccctccct
gcggccgccgaacaaacctttgaccagacagccttcggcgcgctcagtgctcactctcca
ctctcctcctcatctccgacctatgatttccaagcttgtacatccgatgctcgattagtt
ccagactgcctgtctgtgtccaacatgtgcgagagcccagtggactgtgctctgcatcaa
gacgacttcagccttcttgagcagccacaagagggcagccttgtccaagcgcaacatgtt
ccccaccatatgttgtccctacactccagtcttcttacccccaatcaatctcccacaccc
acagattctaacacttacagtgagacggaacaggcagagatcagtattctggctcagcag
atctcctccttggccagcagcttcgccatgtatcacaccctgaacccacttcaaaatgca
atccaacctgcaacaattaacaccctgcccacagcctgtgactggccccatcaccctcct
ctttcctcagtccttcctctgaagcgtgaactgccccttgacgacaacgtgtttgacagc
atcctgaaagacttggacatggccacatggaaaagaaacttgtccacccctggtgttgta
ccatacagctaccagcagggcttgttgcacagcaggaatgggtcccaccagttagaccag
gatgctcttggtctcaccccaagcatcccagaggggccgctgcctacggagcagttcact
gtcatggatgctttcaatttgcagttggaacgccatggccaaaacactgggttgcatcaa
ctcaaccactacatgcagagtggccttcagcaagatggacttgctgaagaaaacctgtac
tga
DBGET
integrated database retrieval system
