Larimichthys crocea (large yellow croaker): 109138871
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Entry
109138871 CDS
T04659
Symbol
cntn1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109138871 (cntn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
109138871 (cntn1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lco00537
]
109138871 (cntn1)
Cell adhesion molecules [BR:
lco04515
]
Immunoglobulin superfamily
Contactins
109138871 (cntn1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lco00537
]
Others
109138871 (cntn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
109138871
NCBI-ProteinID:
XP_019116039
UniProt:
A0A6G0HQM1
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All DBs
Position
XX:complement(11322440..11333938)
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AA seq
1041 aa
AA seq
DB search
MASAALLLLALSSSVSLTAAILFGEPRIYGEDATGYGPIFEEEPVDVVYTEDSPDGRISM
NCRARANPPATYRWRRDNWEIKLMEQPDEHYSLVGGNLVITNPRQKKHAGTYICVARNIY
GTVISKEARVKFGFVEEFPQEERDPVYVKEGQGAVLLCVPPKAWPQEVTYRWIYNEFPVF
LHTDYRRFVSQKTGNLYIAKVEAQDAGNYSCFVSSPITGKSVFSKFIPLIPLPPDEGERK
YPADIRVKFPDTTAMLASNITLECFALGNPIPHIVWRKVDHTDLPPNHEISESGAVLHLY
NVQYEDVGGYECEAINTKGKDWHKAWLYVESAPEWAETINNTQIDIGSEHTMRCVASGKP
FPFIRWYKDGYMYGKGELKFSSLTFDDSGMYQCIAENYWGIKYANAELRVIACAPTFEFN
PVKKQLLGAKDGRVVIECKPRAAPRPRYTWTKGKELLFNNSRISILFDGSLEIHNATIND
EGVYTCFAENDRGKANSSGYLTITEPTSITEAPEDTEVLVGDEVILKCGASFDPMLDIAF
IWAIDFRIIDFESEWEHYERVMNGDGSGDLRIMNVQIWHEGRYTCTAQTVVDSDTAYADL
KVVGVPGPPGIIRVEEIGDTWVKLLWSKGADHNSPILSYTIQTRHFWALNEDDWRDASSS
PAFLDGTLEKAEVTDLYPWMEYQFRIIAINEHGSGEASIPSLKIKTWDAAPVVAPTDVAG
YGGRNGEIVITWAPVQPWYFYGKKFGYIVAFKPHDAYDWWYETISDPETRRYVHRDSYFI
PTDEDFQVREFQVKIKSFNVKGDGPYSLTKVIYYPRDVPTESPTDVYARPVSSHEALVWW
LPVVDTGTGLQQYIEGYQVKYWRKYDDPEPGAHRIFVAASVNQTRLENMLPDSHYLIEVR
AFNGAGLGPPGEHCEMFTKRAPPPDPPRMWRYISWTGQWLYVWWDHIQYDWFGNISFPLY
YKVMFRKTGYIYGKVYITGWHFMDFPMPQVGDYELMVRGRYEGGDGPVRKIRIQGKASMI
TPTLSLVSLVLLAVCIMGLEM
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggctgccttactgcttctggccctctcctcttctgtctctctcacagcggcg
atcctatttggtgagcccagaatttatggagaggatgccactggatatggccccatcttt
gaggaggagcctgtggatgtggtctacactgaggattcaccggatgggagaatctccatg
aactgcagggcacgagcgaacccaccagctacatacaggtggcgccgtgataactgggaa
atcaagctgatggagcagccagatgagcactacagccttgtggggggaaacctagtaatc
accaaccccagacagaagaaacacgctgggacatacatctgcgtggccaggaacatctac
ggcaccgtcatcagcaaggaggccagggtcaagtttggatttgtggaggagtttccccaa
gaagaaagggacccagtgtatgtcaaagaaggacaaggagctgttctgctgtgtgtccct
ccaaaggcctggccacaggaagtaacctatcgctggatctacaatgagttcccagttttc
ctgcacacggattaccgtcggtttgtctcccagaagactgggaacttgtacatcgccaag
gtggaagctcaggatgcaggaaactattcctgttttgtttctagccccatcactgggaaa
agtgttttctccaagttcatccccctcatccccttaccccccgatgagggtgagagaaag
tacccagcagacatcagggtgaagttcccagatactactgccatgctggcctctaatatt
acattggagtgctttgctctgggaaaccccatccctcatattgtttggaggaaggtggac
cacacagacctccctccaaatcatgagatcagtgaatcaggagctgtgcttcatctgtac
aatgtacagtatgaagatgtgggtggatatgagtgtgaagccatcaacactaaaggaaag
gactggcacaaggcctggctgtatgtggagtctgctccagagtgggcagaaaccattaac
aacactcagattgacattggctcagagcacaccatgcgctgtgtggcgtcagggaagccc
ttccctttcatccgctggtacaaagatggatatatgtatgggaaaggagagttaaagttt
tccagtcttactttcgacgactcaggaatgtatcagtgtattgctgagaactactggggc
atcaagtatgccaatgccgagctgcgagtcatcgcctgtgcgcctacattcgaatttaac
cctgtgaagaagcagctccttggcgccaaagatggccgcgtggtgatcgagtgtaaaccc
agagctgctcctagaccacggtacacctggacaaagggcaaagagctcctctttaacaat
tcacgcatttccatcttgtttgatggaagtttggagatccacaatgccaccatcaatgat
gagggtgtctacacgtgctttgccgagaacgacagaggaaaggccaatagttctggttac
ctcaccatcacagagcctaccagcatcacagaagcacctgaagacactgaggtattggtt
ggtgatgaggtgattttgaagtgtggtgcctcattcgatcccatgttggacatcgctttc
atctgggccatagacttcaggatcatcgactttgaatctgagtgggaacactacgaacgc
gttatgaatggtgatggcagcggtgacctgagaataatgaacgtccagatttggcatgaa
ggtcgctacacctgcacggctcagacagtcgtggacagcgatacagcatatgctgatctc
aaggttgtaggtgttcctgggcctcccggtataatccgggtggaagagatcggagacaca
tgggtgaagctgttgtggagtaaaggagcggatcataacagccccattctctcttacacc
attcagaccagacacttctgggctctgaatgaggacgactggagggacgcaagcagctct
ccagcctttcttgacggcactttggaaaaggcagaagtgacagacctgtacccctggatg
gagtatcagttcaggatcattgccatcaatgagcatggctctggagaagccagcataccc
tccctcaagatcaaaacctgggatgctgctccagtggttgctcccactgatgtggcaggt
tatggaggtagaaatggcgagatcgtcatcacatgggcacctgtacagccatggtatttc
tatggcaagaagtttggctacatcgtagcattcaagcctcacgatgcttacgactggtgg
tacgagaccatttcagaccccgagacaaggcgttacgttcacagggattcatacttcatt
cccactgatgaagacttccaggtcagggagtttcaggtgaagatcaagtcatttaatgtg
aaaggagacggaccatacagcctcaccaaggtcatctactacccaagagatgtaccgaca
gagtctccgacagacgtttatgccaggccagtatcctcccatgaagcgctggtctggtgg
ttgccagtggtcgacactggtacaggcctgcagcagtacattgagggataccaggtcaag
tactggagaaagtacgatgatccagagccgggggcacaccgtatatttgttgcagcctca
gtcaatcagaccaggttggagaacatgctcccagactctcactacctcatcgaggtccgt
gccttcaatggagccggccttggaccccctggtgaacactgtgagatgttcacaaagaga
gcaccaccaccagaccctcccaggatgtggcgctatatctcctggacaggacagtggttg
tatgtgtggtgggatcatatccagtatgactggtttggtaatatctccttcccactgtac
tacaaggtcatgttcagaaagacaggctacatctacgggaaagtctacatcactggctgg
cactttatggacttccccatgcctcaggttggagattatgagttgatggtacgcggccgt
tatgaaggaggagatggcccagtcaggaagattaggattcagggtaaagcgtctatgatc
acacccactctaagcctggtgtctttggtgcttctggcggtgtgcattatgggattggaa
atgtga
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