Larimichthys crocea (large yellow croaker): 109138943
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Entry
109138943 CDS
T04659
Symbol
cilp
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
109138943 (cilp)
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
109138943 (cilp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
TSP_1
I-set
Ig_2
CarboxypepD_reg
CarbopepD_reg_2
ig
V-set
TSP1_CFP_C
TSP1_spondin
Ig_5
Ig_4
Motif
Other DBs
NCBI-GeneID:
109138943
NCBI-ProteinID:
XP_019116295
LinkDB
All DBs
Position
VIII:11321053..11327743
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AA seq
1163 aa
AA seq
DB search
MSVWALLLILGITTTTVLTAQGSWRRDNKDSSPSVYHSDDNYEWTTWFNVDHPGGRGDYE
QLDAIRFYYRSRVCETPRAIEARTTEWVPARETGETVHADPTVGFWCLNEEQGPDRNCSN
YAVRFLCSKDNSANIQGTWSPWSDWSPCPALCGQVGVQVRTRNCQSRSVPCSGPKVEGQA
CSGPECPKIDCSLQCVMGKVNAECDVCMCEEHILLGSVRGAGGLTAEGATILRHGKLLTI
TDHNGHFRIPGICPDGNTTLTVSLQGHAILSVSVPYSVERTSVLSIQLTRTEKLHVLSNP
ESKARREGQTAAFCCKVAGTPQPDKYQWFHNNSLLEKQSDSTLVLKDLRSEQAGEYYCRA
SGPSGAIKTKSATLQILGKDEHSCNPTPDSHLIHLPHDCYQNSTDSFYYDVGKCPSKTCA
GQLDNGIRCKDKMAYCCGVKKMEKRQLTCQGYQLPTMVVTECGCQKCVDTKAIVHGRAIA
ADNGEPMRFGHIFMNGARISRTGYKGTFSIQVPPETERLVLTFVDNMQKFINTTKVLPFN
TKGGSVYHEIKLLRKKAPVTISSTEINTLELGEVEGQEPMVQIQIPPNSFYTEKGEVFTG
NVNASVTFLDPRDVSTAAAAQSDLNFVGDEGDTLPLRTYGMFSVDFRGEENNEPLNAGEV
KVFLDSAQVKMADHLNTMKLWSLNPDTGLWEEEGSLQVEKKKRGKREERTFLIGNMEIRE
RRLFNLDVPENRRCYVKVRAFRSERFMPSEQVEGVVVSLINMEPTAGYSTNPRAWGRFDS
VVTGPNGACLPAFCDEQKADAYSAYVMANLGGEELEAVPSAPKLNPNLIGVPQPYLNKLN
YRRSDHEDPRVKKTAFSINVAKPSSNTAEEGNGPVYAFENLKECEEAPFSASHFRFSRVE
GDRYDYNTVPFNEDDPMSWTEDYLSWWPKPMEYRSCYIKVKISSPHEINVRSRNMGGTHP
KTVGQLYGLRDTRSIRDMDQATISAVCLEFKCSGMLYDQERVDRTLVKVIPQGSCKRDHV
NPMLQEYLVNHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFDG
TSDGTSRVMKGNEGVALSFTCGDREVTRQSVFQAQQNTQGQTVTSVVRGEGRQNRRRQRA
NTPRNSRRRSTRNPTGRRTKATS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtgggcacttcttcttatcctgggaatcaccacaaccactgttcttacagcc
caaggatcatggagaagagacaacaaagactcaagtccttctgtgtaccactctgatgac
aactatgagtggacaacatggttcaatgttgatcatcccggaggccgtggagactatgag
cagctggacgcaattcgtttctactataggtcccgagtgtgtgagacgccccgggcaatt
gaagccagaaccactgaatgggtcccagcccgtgaaactggggagacggtccacgcagat
cccactgtgggcttctggtgccttaatgaagaacagggtcctgatcgcaactgctccaac
tatgcagtccgctttctctgttccaaagataacagtgcgaacattcagggtacctggagt
ccatggtcagactggagcccatgccctgccctctgcggccaggtgggggtccaagtgcgt
accagaaactgccagtctcgctctgtgccatgtagtggccctaaagttgaggggcaagca
tgcagtggaccagagtgccctaaaatagattgctccctgcagtgtgtgatggggaaggtg
aatgctgagtgtgatgtatgcatgtgcgaagaacacatcctgctgggttctgttcgtggt
gccgggggtctcactgctgaaggggctaccatccttcgccatggcaaactcctcaccatc
accgaccacaacggacatttccgcatccctggtatctgccctgatggcaacaccaccctg
acagtcagcctgcaggggcatgccatcctcagtgttagtgtgccctatagtgttgaacgt
acttctgttctcagtatccagctgacaagaacagaaaagcttcatgtgttgagcaaccct
gagagcaaggccaggagggagggacaaactgcagccttctgctgcaaagtggcaggaacg
ccacaaccagacaagtaccaatggtttcataacaacagtctcctggagaagcagtccgac
agcaccttggtcctaaaagatctgcgttctgagcaggctggggagtactactgcagagca
agtggtccatctggggctattaagaccaaatcagctacacttcaaattttaggtaaagat
gagcattcatgtaatcccacacctgattcccacctcatccatctcccacatgactgctac
caaaacagcacggactcgttctactacgatgtcggcaagtgcccctcaaagacatgtgct
ggacagctggacaatggcatcaggtgcaaagacaaaatggcttactgctgtggtgtaaaa
aagatggaaaagaggcagctaacttgccaaggctaccaactgcctaccatggtggtgact
gagtgtggctgccagaaatgtgtggacactaaggccattgtgcacggtagggccattgct
gcagacaatggtgagccaatgaggttcggtcatatctttatgaatggagccagaatcagc
cgtacaggctacaaaggtacattctccatccaggttcctccagaaacagagaggctagtc
ctgacctttgtggacaacatgcagaaatttatcaacaccacaaaggtacttccatttaac
accaaaggagggtctgtttatcatgagatcaaacttcttaggaagaaagctcctgtaacc
attagctctacagaaatcaacactctcgagcttggggaggtggaaggccaagagccaatg
gttcaaatccagattcctcccaattccttctatacagagaaaggggaggtcttcacgggt
aatgtaaatgctagtgtaacgttcctcgaccccagagatgtctccacagctgctgcagct
caaagtgatctcaactttgtaggagatgaaggagataccctgcccctaagaacctatggg
atgttctctgttgactttaggggtgaggaaaacaatgagcccctgaacgcaggtgaagtg
aaggtgttcttggactctgcccaagtgaagatggctgatcatcttaatactatgaagctg
tggtcactgaaccctgacactggcctgtgggaggaggaaggaagtctgcaggtagagaag
aaaaaaagaggcaaaagggaggagagaacctttctgattggtaacatggagatcagagag
agacgtctttttaacctggacgttccagagaaccgcaggtgttatgtgaaagtgagggcc
ttccgcagtgaacgctttatgcccagtgagcaggtggagggagttgttgtaagtcttata
aacatggagcccacagccggctactccactaacccacgtgcctggggccgttttgatagc
gttgtgactggccccaatggtgcctgtctccctgccttctgcgatgaacaaaaagctgat
gcctattctgcctacgtcatggccaaccttgggggagaggagctggaggctgtcccttct
gctccgaaactcaatcctaatctcattggagtgcctcagccttacctgaataagctaaac
tacaggcggtctgaccatgaggatcccagagtgaagaagacagcattcagcatcaatgtg
gcaaaaccaagttccaacacagctgaggaaggcaatgggccagtgtacgcctttgagaac
ttgaaagaatgtgaggaggccccattcagtgcgtcacacttccgtttctcaagagtagaa
ggagaccgctacgattacaacacagtgcctttcaacgaagatgacccaatgagctggacc
gaagactacctctcctggtggcccaagcctatggaatacaggtcttgctacattaaagtc
aaaatcagcagcccacatgagatcaatgtgcggtcccgcaacatgggtggcacccacccg
aagacagtaggccagctgtatgggctccgcgacactcgaagcatccgtgacatggaccaa
gcgactatttcagctgtgtgcctggagttcaagtgcagtggcatgctgtatgatcaggaa
cgtgtagatcgtaccctggttaaagtgattccacaaggaagctgtaagagagatcatgtc
aacccaatgcttcaagagtatctggtcaaccacctgcccctagccgtcaacaatgacacc
aatgagttcactatgctagcacctcttgacccactaggccataactatggaatttatacg
gtgacagaccaggatccccgcacagccaaagagattgcccttggacgctgctttgatggc
acttctgatggtacatctcgtgtcatgaagggcaatgagggcgtagcgctgtcattcacc
tgcggagaccgtgaggtcacacgtcagagtgtcttccaggcccagcagaatactcaaggt
cagacagttacaagtgtagtgagaggagaaggccgacagaaccgacgccggcagagggcc
aacacaccacgcaacagccgtagacgtagcaccagaaatccaacaggaagacgcacaaag
gcaacgagctaa
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