Larimichthys crocea (large yellow croaker): 109139479
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Entry
109139479 CDS
T04659
Symbol
rars2
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109139479 (rars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lco01007
]
109139479 (rars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lco03016
]
109139479 (rars2)
03029 Mitochondrial biogenesis [BR:
lco03029
]
109139479 (rars2)
Enzymes [BR:
lco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
109139479 (rars2)
Amino acid related enzymes [BR:
lco01007
]
Aminoacyl-tRNA synthetase
Class I (G)
109139479 (rars2)
Transfer RNA biogenesis [BR:
lco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
109139479 (rars2)
Prokaryotic type
Other AARSs
109139479 (rars2)
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
109139479 (rars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
UvrD-helicase
tRNA-synt_1g
RALGAPB_N
R3H-assoc
Motif
Other DBs
NCBI-GeneID:
109139479
NCBI-ProteinID:
XP_027140254
LinkDB
All DBs
Position
XI:5197483..5206393
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AA seq
580 aa
AA seq
DB search
MACFFRRRIAEKLSKTLQQSEDAFIPALSAVPVFKKQQSAADFKLSISALRNSQILPSDG
DIQLQTEDLAAQLQQDSVVEDISAGCGVISFKVNRQLLVQKMLETFGKEQDERFGLNSEL
LSRLKRGTTLVEYSSPNIAKKFHAGHLRSTIIGNFIANLKQSLGNNVIRMNYLGDWGMQF
GLLGAGFGQFGCQEKLKQNPLQHLFEVYVQVNKEAEHNEDMKQAARDFFRQLEQHESEAV
SLWQQFREITVDEYQHIYKRLGVHFDIYSGESFHQDQAQEVVQQLQSRGLLKTSERGTGV
VDLSPAGDMSSVCTVLRSDGTTLYITRDLAAAIDRSEKYSFDEMIYVTDKSQAGHFHQLF
QILLAMEHSWADRCLHVPFGLVRGMKTRSGEVVFLEDVLDEARSRMLHNMSRSKTTKEMY
DPEDTAEKVGISALIIQDFKGPLQSDYTFDWDRMLQAQGDTGVFLQYTHARLRSLIQKNE
GAEADMFDPSLLLEQTSITILQHLLRYDEVLYQSAQDLQPKHLVNFLLKLCHLIASAHRE
LPVKGSSQNVAQARLRLFGRACSVLADGMKILGITPVDKM
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtttcttcaggagaagaatagccgagaagctgagtaagacgctgcagcagtct
gaggacgccttcataccagctctgtcagctgttcctgtttttaagaaacagcagagtgct
gccgacttcaaactgtccatcagcgcattaagaaacagtcagattttgccatccgatgga
gacattcagctgcagacagaagacttggccgctcagttgcagcaggacagtgtggtggaa
gacatatccgctggatgtggagtgatcagctttaaagtgaatcgccaacttcttgtccag
aaaatgttggagacatttggaaaagagcaggatgagagatttgggttgaatagtgaactt
ctcagtcgtctcaagagaggaacgacattagttgaatatagctctccaaatattgccaaa
aaattccacgctggacacttacgatctacaattatcggtaacttcatcgctaatctaaag
cagtcccttggaaacaacgttattcgaatgaactacctcggagactgggggatgcagttt
ggcctgctcggagctgggtttggccagtttggatgtcaggagaaactgaaacagaatcct
ttacagcatttgtttgaggtttacgttcaagtaaacaaggaggcagagcacaatgaggac
atgaagcaggcagccagagacttctttagacagctggagcagcatgagagcgaggctgtg
tcgttatggcaacagttcagagagatcacagtggacgagtatcagcacatttacaagcgg
ttaggcgtccactttgacatctactccggggagtcctttcaccaagatcaagcccaggag
gtggtgcagcagctgcagagccgaggcctgttgaaaacctctgagagaggaacgggtgtg
gtggatctctcacctgctggagacatgagcagcgtttgtacggtgctccgcagtgacggc
acaactctctacatcaccagagatctcgccgcggctatcgaccgatcagaaaaatatagt
tttgacgagatgatttatgtgacagacaaaagtcaagccggtcacttccaccagttgttc
cagatcctgctcgcaatggaacattcctgggctgacaggtgtctacacgttcccttcggc
ctggtgcgaggcatgaagacgcggagcggcgaggtggtgtttctggaggacgtgctggac
gaagctcggagcaggatgctgcacaacatgagccggtcaaaaacaacaaaggaaatgtac
gaccccgaggacacagcagagaaagtgggaatcagtgcactaataatccaggactttaaa
ggtcctctgcagtctgactacacgttcgactgggacaggatgctgcaggctcagggcgac
acgggagtcttcctccagtacactcacgctcgactccgcagtttaatacagaagaatgaa
ggtgcagaagctgatatgtttgatccatccctcctgcttgagcagacgagtatcaccatc
ctgcagcacctccttcggtatgatgaagtgttgtaccagtcagcccaggacctgcaaccc
aaacacctggtcaactttttattgaagttatgccacctgatcgcctcagcacacagagag
ctgccggtaaaaggaagctcgcagaatgtcgcacaggcgaggttacgactgtttggcaga
gcctgctcggtcctggccgacgggatgaagatcctgggcatcacaccggttgataaaatg
tga
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