Larimichthys crocea (large yellow croaker): 109139843
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Entry
109139843 CDS
T04659
Symbol
vcl
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04510
Focal adhesion
lco04517
IgSF CAM signaling
lco04518
Integrin signaling
lco04519
Cadherin signaling
lco04520
Adherens junction
lco04810
Regulation of actin cytoskeleton
lco04820
Cytoskeleton in muscle cells
lco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109139843 (vcl)
04518 Integrin signaling
109139843 (vcl)
04519 Cadherin signaling
109139843 (vcl)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109139843 (vcl)
04520 Adherens junction
109139843 (vcl)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109139843 (vcl)
04810 Regulation of actin cytoskeleton
109139843 (vcl)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109139843 (vcl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
109139843 (vcl)
04147 Exosome [BR:
lco04147
]
109139843 (vcl)
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109139843 (vcl)
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109139843 (vcl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
ESAT6-like
Motif
Other DBs
NCBI-GeneID:
109139843
NCBI-ProteinID:
XP_019120339
UniProt:
A0ACD3RSJ1
LinkDB
All DBs
Position
XVI:complement(17313224..17336709)
Genome browser
AA seq
1066 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEEALKNREFTFEKMSAE
INEIIRVLQLTSWDEDAWANKDTEAMKRALGLIDSKMAQAKNWLRDPNAPPGDAGEQAIR
QILDEAGKVGELCAGKERRDILGTAKTLGQMTDQVSEMRARGQGASPAAMQKAQQVSQGL
DVLTGKVGNAARKLEAMTNSKQAIAKRIDAAQNWLADPNANPEGEENIKALLTEAKKIAD
MCEDPKERDDILRSIGEIAAMTAKLSDLRRQGKGDTPEARALAKQIATALQNLQSKTNKA
VANSRPAKAAVHLEGKIEQAQRWIDNPTIDDSGVGQAAIRGLVAEGRRLANALPGPYRQE
MLGKCEQVEQLMAHLADLAARGEGDSPQARAVAQQLQAALKDLKGKMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPLDVPNRDEVFDERAANFENHANKLGTTAEKAAAVGTANKSTVEG
IQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCRVAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
AMVKAASDELSQTISPMVMDAKAVAGNIQDPSLQKGFLDSGYKILGAVAKVREAFQPQEP
DFPPPPPELEQLTLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGDMVNEPMMV
AARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacacgaaaacgatagaaagtatcctggagccggtggctcagcagata
tcccatctggtgattatgcacgaagaaggtgaagttgacgggaaagctatcccagatctg
acggcaccggtggctgccgtacaggcggctgttagcaaccttgttcgggtgggaaaggag
actgtacaaaccacagaggaccagatcatgaaaagagacatgccaccagcttttatcaaa
gtggagaatgcgtgcactaagctggtgcaggctgcctccatgctgaaagctgatccatac
tctgtgcctgctcgggattacctcatcgatggctcccggggaatcctctccgggacctct
gaccttctcctgacatttgatgaggctgaggtccgcaaaattatccgcgtgtgcaaaggc
atcctggagtacctgacagtggctgaggtggtggagtcaatggaggacttgatcacatac
acaaagaacttggggccagggatgacaaagatggcaaagatgatagacgagcgacagcag
gagctgacgcaccaggagcaccgcgtgatgttggtcaactccatgaacacagtcaaagag
ctgctgcccatcctcatctcaggtatcaaaatctttgtgacaaccaagacatctggcagc
cagggcgtggaggaagccttgaagaaccgtgagttcacttttgagaagatgagcgccgag
atcaacgagatcatcagagtgctgcagcttacctcctgggacgaggacgcctgggctaac
aaggacacagaggccatgaagagggctctggggcttatcgactcaaagatggcccaggct
aagaactggctgagggatccaaacgctccaccaggggatgcaggcgagcaggccatccgc
cagatcctcgatgaagctggaaaagtcggtgagctgtgcgctgggaaggagcgcagagat
attcttggcacagctaagactctgggccagatgaccgaccaggtgtctgagatgagggcc
agaggtcagggcgcatccccagccgccatgcagaaggcacagcaggtctcccaggggctc
gacgtgcttactggcaaggtgggaaatgctgctcgcaagctggaggccatgactaactcc
aagcaggccatcgccaaaaggattgatgctgcacagaactggctggcagaccctaacgcc
aacccagagggagaagagaacatcaaggccctgctcaccgaggccaaaaagattgcagac
atgtgtgaagaccccaaagaaagagatgacatcttgcgctctattggagagattgctgcc
atgactgccaagctgtctgatctcagaagacagggtaaaggtgacactcctgaagccaga
gctttggctaaacagattgcaacagctctccagaatctgcagtccaagaccaacaaagct
gtggccaacagcaggcctgcgaaggcagctgtgcacttggaaggaaagattgagcaggca
cagcgctggattgacaatcccaccatcgatgacagcggtgttggccaggcagccatccgc
gggctggtggcagagggccgcaggctggccaacgctctgccgggtccttacaggcaggag
atgctgggtaaatgtgagcaggtggagcagctcatggcccatttggctgacctggctgcc
cgcggtgaaggagactcccctcaggcacgtgctgtggctcagcaactccaggcggctttg
aaagacctgaaagggaagatgcaagaagcgatgactcaggaggtgtccgacatcttcagt
gacaccaccacccccatcaagttactggcagtggctgccacggcccctctggatgtcccc
aacagagatgaggtctttgacgagagggctgccaactttgagaaccacgccaataagctt
ggcaccacagcagagaaggctgctgctgtcggcactgccaacaagagcacagtggaggga
atccaggctgccgtcaagtcaacaagagacttaacaccacaagtggtgtctgctgctcgt
attctgctgagaaaccctggaaaccaagctgcatatgagcattttgaaaccatgaagaat
cagtggattgacaacgtggagaaaatgacaggtttggtggacgaggccatcgataccaaa
tctttgctggacgcctcagaggaggccatcaagaaggacctggacaagtgccgtgtggcc
atggccaaccaccagcctcagatgctggtcgccggtgccaccagcatcgcccgcagagcc
aaccgtatcctcttggtggcaaagcgagaggtggagaactcagaggatcctaaattcagg
gcgatggtgaaggctgcatcagatgaactgagccagacgatttctcctatggtgatggat
gctaaggcggtggctggaaacatccaggatccaagtcttcagaaaggctttttggactca
ggttataagattctcggtgctgtggcaaaggtcagggaggcattccagccccaggagcca
gacttcccaccacctcctcctgaactggaacagcttactcttaatgatgaggcagcacca
cccaaacctcctcttcctgagggcgaggttcctccacccaggcctcctcccccagaggag
aaagatgaggagttccccgagcagaaggctggtgatatggtcaacgagcccatgatggtg
gctgccaggcagctccacgatgaagctcgcaagtggtccagcaaaggaaatgacatcatc
ggtgctgccaaacgaatggccttgctcatggcagagatgtcacgtctggtgcgcggaggc
agcggaaacaagcgtgcgctcatccagtgcgccaaggacatcgcgaaggcctctgatgaa
gtcacgcggctggctaaggaagtggccaagcagtgcactgacaagcgtatccggactaac
ctcctccaggtgtgcgagcgcattcccaccatcagcactcagctcaaaatcctgtccaca
gtcaaggccaccatgttgggtcgtaccaacatcagcgaagaggagtcagagcaggctact
gagatgttggtgcacaatgctcagaacctgatgcagtctgtgaaggagacggtcagggag
gccgaggcagcttccattaagatccgaacagatgcaggctttaccctccactgggtcaga
aagaccccctggtaccagtaa
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integrated database retrieval system
