Larimichthys crocea (large yellow croaker): 109139870
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Entry
109139870 CDS
T04659
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger BED domain-containing protein 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
109139870
04121 Ubiquitin system [BR:
lco04121
]
109139870
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
109139870
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109139870
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
109139870
NCBI-ProteinID:
XP_027137115
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All DBs
Position
VIII:33686298..33691363
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AA seq
637 aa
AA seq
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MEGKSSGPSCSGLNLVAHPRAKSKVWKYFGXDTDADGCILHWKRIILPCMMSQIAYXGNT
SNLSYHLEKNHPVEFSEYVKSNTDQMREAFASAFSRXRLSFRSSCSATVPGPNIRQSLGY
ENRRHNDLTAAVINFICEGLYPVSVVEEPTFKTLMSTVDPGYSPPSKTDLLVKMLXQMYA
VPRDMVFSELASVVNCGVTTDLWQSQTQNRTYISLSMHSVNYNSTTGFSMXNKCLKTFDV
QEDNXAENITRAMYETFVEWGNNPQSXRCHHKWFSGHVKACSLLELSVEMPCLGHTINRA
MDEAFQLPRVDCFLVCCRKLVDHFREPSMYLLREKQKQHGLAQCVLITDRGRSWLATLAM
LQRLKQQQVAITATLTESSSSHHFRLWCPDWALLEGLTEILQPLKXVANMITSCRYPTXS
MVRPVLHMLLNTTLKSGRGLKEISMTKEVISRSYQAPNSQNSQLSQEISIFLNIXTFLDP
RTKKLPFLSTQERTKVENNIIEVGKGSPXDSRLQSDHARXFLLYLRPPSKKTCXENPRPA
VSHDNPLAAIFCQSDADHSQEELHAQVVEELSNYKSQRVLGLNEDPYXWWTSHAPVPHPP
KVLQKYWCVPATSVPCHSVHSLDCFVGKRNRVICSSF
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggagggtaaaagttcaggaccttcatgctctggcctcaatctggttgcgcacccacgg
gcaaaaagcaaagtctggaaatactttggcnttgacacagatgcagatggctgcatattg
cactggaaacggattatactgccgtgtatgatgagtcaaattgcttacnccggaaacacc
tccaatctgtcataccatcttgaaaagaaccaccctgtagagttcagtgagtatgtgaag
agcaacacggatcagatgcgtgaggcgtttgcctcggcattctccagataaagactgagc
ttcaggtcttcatgttcagcaacagtcccaggaccaaacataaggcagagcttaggctat
gaaaacagaagacacaatgacttgactgctgctgtcatcaacttcatctgcgagggtttg
taccctgtatctgtagttgaagaaccgactttcaagaccttaatgagtaccgttgatcct
gggtactctccaccaagcaagactgacctgttagttaaaatgcttnctcagatgtatgcc
gtgcccagggacatggtctttagtgagcttgctagtgttgtgaattgtggtgttactaca
gacctttggcaaagccaaacccagaatagaacgtacatttcactctctatgcattcagtt
aattacaacagtactactggcttctctatgnacaacaagtgccttaaaacctttgacgta
caagaggacaacncagctgagaacatcaccagagcgatgtatgaaacttttgttgagtgg
ggaaataacccacaaagttagcggtgccaccacaaatggttcagtggacatgtcaaagca
tgctcactcctggaactatcagtggaaatgccttgccttggacataccatcaaccgtgca
atggacgaagccttccagctgccacgagttgactgttttttggtatgttgccgcaaactt
gtggatcatttcagagaaccgtcaatgtatctgctgagggagaaacagaagcagcatggc
cttgctcaatgtgtactcattacagacaggggtaggtcttggttggcaacgttggcaatg
ctgcaaagactgaaacagcaacaggttgctataactgcaacacttacagagagttccagc
agccaccattttcgactttggtgtcctgactgggccttgttggagggcttgactgaaatc
ctccagcctttaaagnttgtggcaaacatgataacttcttgcaggtacccaacanttagc
atggttaggcctgtgcttcatatgctgttgaacaccaccctcaagtcaggaaggggactc
aaagagatcagcatgaccaaagaggtcatctcaaggtcctatcaagcacctaattcacag
aattcacaactatcgcaagaaatttcaatattcctcaacattngtaccttcctggatcct
cgtacaaagaagttgcctttcctgtccacccaggaacgcaccaaagttgagaataacata
attgaagtaggcaaaggcagtccttgagacagcagattgcagagcgaccatgccagatga
tttctcttgtatctgaggccacctagcaaaaaaacatgcnacgagaatcctcgaccagca
gtgtcccacgacaaccctttggctgctatattttgccagtctgatgcagaccacagccag
gaggaactgcatgcacaagtggtagaggagctgagcaactacaaatcacagagagtccta
ggtttaaatgaggacccttacntatggtggacaagtcatgcacctgttccccaccctccc
aaggtgctccagaagtactggtgtgttcctgctacaagtgtaccgtgtcacagcgttcac
tctcttgactgttttgtggggaagaggaaccgcgttatttgctccagcttttag
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