Larimichthys crocea (large yellow croaker): 109140514
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Entry
109140514 CDS
T04659
Symbol
plcd1
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X1
KO
K05857
phosphatidylinositol phospholipase C, delta [EC:
3.1.4.11
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00562
Inositol phosphate metabolism
lco01100
Metabolic pathways
lco04020
Calcium signaling pathway
lco04070
Phosphatidylinositol signaling system
Module
lco_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
109140514 (plcd1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
109140514 (plcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
109140514 (plcd1)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
109140514 (plcd1)
Membrane trafficking [BR:
lco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
109140514 (plcd1)
Endocytosis
Macropinocytosis
Phospholipase C
109140514 (plcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
EF-hand_like
EF-hand_10
C2
PH
EF-hand_6
EF-hand_7
PH_12
EF-hand_1
EF-hand_PLCG2
TEP1_N
WHD_MCM8
Motif
Other DBs
NCBI-GeneID:
109140514
NCBI-ProteinID:
XP_019123027
LinkDB
All DBs
Position
XXIII:9832785..9846527
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AA seq
776 aa
AA seq
DB search
MSCLHKRPKRTTSEEQVFLEKVRKIAQENGKRLGLEGDEDLQFLLVGGELVKIRSSSWKK
NRFFKLQEDCKTFWHESHKTFRRNQTFSVDDIDSVRKGRQSEVLNKHTEPSVEEKCFSII
FKGRKKNLDLMAASGPEAKQWVSGLEKIIFNMRNLSHQQKSEHWIVNCMRKADKNEDNKM
TLKELKHFLRQINVEVDDTYAADLFKQCDTSNSGTLEDSEIQHFYSLLTHREEIDVIYGK
FAETEGQMSARNLLDFLLNEQREEASTMADALKLIEKYEVDATAKQKKHMTKDGFLMYLH
HEDGSILNPAHKNVYQDMNQPLNHYYISSSHNTYLMEDQLKGPSSTEAYIKALMKSCRCV
ELDCWDGANGEPVIYHGYTLTSKVLFKDVIKAIKDYAFKTSEYPVILSLENHCTVDQQKI
MAHHMISILGDALVTKPLGNTLPTNFPSPEELKGKFLIKGKRLNKLDAIFNNNNTLEEDT
VSEEDEAADCKENGQKAKPKKSKIKLAKQLSDMVIFCKSVHFNGFEHAKDNHSFYEMSSF
KEGKAFNLADTSATAYIHHNMDKLSRIYPAGSRTDSSNYNPVPMWNVGCQIVALNFQTPS
KEMDLNQGRFLPNGCSGYVLKPEFQRNLSSQFNPSTLTEGPWLKKKTFHVMVISAQQLPK
INKDKHKSIVDPLVRVEIYGVATDNASKETHYIENNGFNPMWNERFQFDIHVPELAMVRF
VVEDYDSTSQNDLIGQYCLPLTSVQNGYRHVPVLTKSGDVISSAGLFVHLMLIDAQ
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgcttacataaacgtccaaagaggacgacatccgaggagcaggttttcctggag
aaggtgagaaaaattgcgcaggagaatggaaaacgcttaggtttggagggagatgaagat
ctacagttcctgctggtcggcggggagctggtcaagattcgctctagctcctggaagaag
aaccgcttcttcaaactgcaggaagactgcaaaacattttggcatgaatctcacaaaaca
ttccggcgaaaccagaccttttccgtcgatgacatcgattcagtgcgcaaaggccgccag
tctgaggtgcttaataaacacaccgagcctagcgttgaagagaagtgcttctccataatc
ttcaagggccgcaagaagaatcttgacctgatggcagccagtggaccagaggcgaaacag
tgggtcagcggcctggagaagatcatcttcaacatgcgcaacctcagccaccagcagaag
agtgagcactggatagtcaactgcatgcgaaaagcagacaagaatgaggacaacaagatg
accctcaaggagctgaaacacttcctgcgacagatcaatgttgaagtggacgatacttac
gcagcagaccttttcaagcaatgtgacacgtccaattcggggaccttggaggactcagag
atccagcacttctacagcctgctgacgcaccgggaggagatagatgtgatttatgggaag
tttgctgaaacagaaggtcagatgagcgccagaaatcttctggacttcctgttaaatgag
cagagggaggaagcgtccaccatggcggacgccctcaaactgattgaaaaatacgaggtg
gatgcgacagcgaagcagaagaagcatatgaccaaagacggcttcttgatgtacctgcac
catgaggatggctccatcctcaacccagctcacaaaaacgtgtatcaggacatgaaccaa
cccctcaaccattactacatctcctcttcacacaacacatatctgatggaggatcaactc
aaaggacccagcagcacagaagcctacataaaagcgctgatgaagagctgtcgctgtgtg
gaactggactgctgggacggggctaacggcgagcctgttatttaccacggctacacactc
acatccaaagtgctcttcaaagacgtcataaaagccatcaaagattacgccttcaaaacg
tctgagtacccagtgatcctgtccctggagaaccactgcaccgtagaccaacagaagatc
atggcccatcacatgatctccatcctgggtgacgctttagtcacaaaacctctgggcaac
accctgcccaccaacttcccctcaccggaggagctgaagggcaagttcctcatcaaggga
aagagattgaacaaactagatgctatcttcaacaataacaacactttagaggaagacacc
gtgtctgaagaggatgaggctgcagattgtaaggagaatggacaaaaagccaaaccaaag
aaatccaaaatcaaacttgccaaacagctctcagacatggtcatcttctgcaagagtgtc
cattttaatggctttgaacacgccaaggacaaccatagcttctatgagatgtcgtccttc
aaggagggtaaagctttcaacctggctgatacttcagctactgcctacatccatcacaac
atggacaaactcagtcggatctacccagcgggctcgagaactgactcctccaactataac
ccagtgcccatgtggaacgttggctgccagattgtggcgttgaacttccagactccctcc
aaggagatggacctaaaccagggtcggtttctgccaaatggttgtagtggctacgtcctg
aaaccagaatttcagagaaacctgtcctctcagtttaatcccagcacattaaccgaaggg
ccctggctaaagaagaagacctttcacgtcatggtgatctcagctcagcagttacctaaa
atcaacaaggacaaacacaaatccatcgttgaccctctggtaagagtggagatctatggg
gtcgcgacagacaacgccagcaaggagacacactacattgaaaacaacgggttcaaccca
atgtggaatgagagattccagtttgacatccacgttccagagctggccatggttcgattt
gtggtggaggactatgactcaacgtcccagaatgatctcatcgggcagtactgtctacca
cttaccagtgtacagaacggatatcgccacgtcccagtgttaaccaaaagcggagatgtc
atcagctcagccggactgtttgtgcatctcatgctcatcgacgcccagtag
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