Larimichthys crocea (large yellow croaker): 109141210
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Entry
109141210 CDS
T04659
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109141210 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
109141210 (rad54b)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
109141210 (rad54b)
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GFIT
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NCBI-GeneID:
109141210
NCBI-ProteinID:
XP_027143114
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Position
XIII:16837694..16850164
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AA seq
944 aa
AA seq
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MRRSGAPSQLLGNASKKPRFVAPGPSSSCPAPESKPLTPKLGLSNALEKVQKSLAAPAQS
KTEYEAQPKAAQPATALSKALARVLCATESKENEAKTEDPNNGSEEYTEDSGPAGVNGYP
QLTPGLPRAPLLSVGSSHVSVAAGSDSGCSQDGVRYFSVMWCKASKKKHKRWEGDAVLVT
RGRTATLKDMEGKDIGKGSGYKVSVLASLSEGETLMIGGKEVEVMGVISPEDFARGRCFQ
EIPVEREELQTKSAPPPPSRRLASKPFCPPTMLGRADHPGSKPEDEQTCRPRHDPLAPGA
LVMPRPSPNHQWSNNKLGLPVVDVVVDPYLTTHLRPHQRDGLLFLYECVMGMRAVACHGA
ILADEMGLGKTLQSVALAWTLLKQGPYGGKPVAKRVLVVTPGSLVQNWGAEFSKWLGRER
ISVFTVDQDHRIEQFLLSPLHSVLVISYEMLLRCLEQVQKVEFGLVICDEGHRLKNSSIK
TSSALSSLSCNRRVILTGTPVQNDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILRSRQP
SCTDEERVLGEERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCDPSPLQRELYKHL
LCHRVFRACLQGSVQTHTHLHCITALKKLCNHPGLLHSTVKERKDRGSVESSLYDGLVEL
FPESYSSGGFNTADSGKLLVLSDLLTAIRQLSPSDRAVVVSNYTKTLDLLQDLCVHMGYT
FCRLDGHTPTNQRQRLVDSFNSPYSQNFLFLLSSKAGGVGLNLVGASHLVLYDIDWNPAN
DIQAMARVWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFST
SELRDLFSLTDTPSLTHELLNCTCSMDGSVQAVVQEDEQVSDRPCQLGRQGDHGGAGQKH
LSMSELMQWKHFSGDTHTFSDPYLDYARNNITFAFQTTISQTTQ
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgctcaggagctcccagccagctcttgggtaatgcttcaaaaaagcctcggttt
gtggctcctggaccatcatcttcatgtcctgcccctgaatccaagccgcttacccccaaa
cttggtttgagcaatgcactggaaaaggtccagaagagtctagcagcaccagctcagagt
aaaacagagtatgaagcccagcccaaagctgcccagcctgctacagccttgtcaaaggct
ctggctcgtgttctctgtgcaacggaaagtaaagaaaatgaggctaagacagaggatcct
aataatggctcggaggagtacacagaggacagcggaccagcaggagtgaacggttaccct
cagttgactcctgggttacctcgagcccctctgctgtcagtggggtcaagtcatgtctct
gtagctgcaggctcggactctggctgcagtcaggacggagtgagatacttcagtgtgatg
tggtgtaaggccagtaagaagaaacacaagcgctgggagggcgatgcggtcctggttaca
agaggacgcacagcaacactgaaagatatggagggcaaggacattggcaagggaagtggc
tacaaagtgtccgtgttggcctccctgtccgagggagagaccctgatgattggagggaag
gaggtggaggtgatgggggtcatttctcctgaggactttgccaggggacgttgcttccaa
gagatcccggtagagagagaggagctgcaaacaaagtcagctccgcctcctccctctcgt
cgcttggcgtccaaacctttctgccccccaacaatgctggggagagcagatcatccagga
tccaaaccagaggacgaacaaacctgcagacctcgacacgatccactggctccaggtgca
ctggtgatgcctcgtccctctcctaaccaccagtggtctaataacaagttggggcttcct
gtggttgatgttgttgttgacccttacctgaccactcacctgcgaccccaccagagagac
ggtctgctctttctctatgagtgtgtcatgggcatgagagctgtggcttgccatggggct
attctggctgacgagatgggtctggggaagaccctccagagtgtggctttggcctggact
ttgcttaaacaaggaccatacggtgggaaaccagttgctaagcgcgttcttgtggtcacc
cctggcagcctcgtgcagaactggggtgcagagtttagcaagtggctgggccgtgagcgg
atcagcgttttcactgtggatcaggaccacaggatagagcagtttctgttgtcccctctg
cacagcgttctcgtgatcagctatgaaatgctgctgcgctgcctggagcaggttcagaaa
gtagagtttggccttgtgatttgtgacgagggccacagattaaaaaacagcagcattaaa
acgtcctcggcgctcagcagcctgagctgtaatcgcagagtcatactgacaggcacccca
gtacagaacgacctgcaggagttctacgctattatagagtttgttaacccggggattctc
gggtcgtccacggcatacaggaaagtgtatgaggagcccatcctacgctccagacagccc
tcctgcacagatgaggagagagttttgggagaagagcgagcagcggagctctctcgcctg
actggcatgtttatcctgagacggacgcaggagatcatcaaccgctacctgcctcctcgt
ctcgactggacgttgttctgcgacccgtcccctctgcagcgagagctgtacaagcatctc
ctctgccacagagtcttcagagcctgccttcagggctccgtgcaaactcacacacatctg
cactgcatcactgccctgaagaagctctgtaaccatcctggtctgctccactccactgtc
aaggaaagaaaagatcgtggttcagtggagagctctttatacgacggtctggtggagctc
tttccagaatcctactcttcaggtggatttaacactgctgactctggaaaactcctggtt
ctgtcagatctgctgaccgccatcagacagctcagcccttcagacagggcggtcgtagtg
tccaactatactaagacacttgacttgctccaggacttgtgtgtacacatgggctacacc
ttctgccgacttgacggacacacccccaccaatcagagacagcggctggtcgacagtttt
aacagtccgtactctcagaacttcctgtttctgctaagctccaaagcaggcggggtgggg
ttaaatctggtgggtgcttcccacctggtgctgtatgatattgactggaaccctgccaat
gacattcaggccatggctcgcgtatggagagatggacagaagaaaactgtgcacatctat
cgcctcctcactgcaggtactattgaggagcgtatattccagagacaggtgtccaaacag
gggctttctgggacggtggttgacctgggaaaaggggcggagcacaccagcttctccacc
agtgagctacgagatcttttcagcctgacagacacaccctctctaacacacgaactactg
aactgcacctgcagcatggacggttcagtccaagctgtcgtacaggaggacgagcaggtc
tctgataggccgtgccagctcggtcgccaaggtgaccacggtggggcgggccagaagcat
cttagcatgtcggagttgatgcagtggaaacatttctctggtgacacacacaccttctca
gacccctatcttgattacgcacgaaacaacatcacctttgccttccagaccaccatctct
cagacaactcagtaa
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