Larimichthys crocea (large yellow croaker): 109141561
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Entry
109141561 CDS
T04659
Name
(RefSeq) BDNF/NT-3 growth factors receptor isoform X1
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109141561
04020 Calcium signaling pathway
109141561
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lco01001
]
109141561
Enzymes [BR:
lco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
109141561
Protein kinases [BR:
lco01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
109141561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRR_8
Ig_2
C2-set_2
LRR_5
Haspin_kinase
LRRCT_2
LSR
Acyl-CoA_ox_N
LRR_4
Motif
Other DBs
NCBI-GeneID:
109141561
NCBI-ProteinID:
XP_019127943
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Position
IX:4941444..4957484
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AA seq
795 aa
AA seq
DB search
MDSSAGEYGMARLGLFLVLMGLWRFSDACPASCTCSISRIVCNDSVPGIEDFPVLTLDDM
ENITEIYIANQNRLFDMNDNSLRHYINLRNLTVIRTRLTSISSDAFFNNIRLQYVNLRDN
NLSTLSWRTFQNFNTTFPLLLSGNPLDCVCENLWIKLRLLEEADSQDLKCIDEREVSKDL
ATLSLPDCVLPKVEVTPKNVTVMQGTDVKALCTASGSPPPEIVWNLDFLSTRYETDLSDM
ESSTIALSGVSPDDNGKMITCSADNMVGQTEASILLNILFAPTIQQLLEPEQDHHWCIPF
SVTGNPKPELKWYHENLPLDEQDYIRTMIHVSIRSEYHGCLQLVNPTHIHNGVYRLVAKN
EYGQDEKNILALFIDPPYPDHTAEDLYDYPTEPTPPPLDDSVAVYVVVGIAGVALTGCVL
MVIILKYGRNSKFGIKGSSSVISNDDDSASPLHHVSNGNNTPSSSEMGPDAVIIGMTKIP
VIENPQYFRNSGSMLKSDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLTPDQEKLHV
AVKTLKEANESGRADFYREAELLTNLQHEHIVTFYGVCVESDPLIMVFEYMKHGDLNKFL
RSHGPDAVLMADGQHSILVELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN
LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRRFTTESDVWSLGVVLWEIF
TYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPYMRLNIKEIHSML
QSLAKASPVYLDILG
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggactccagcgcgggggaatatggcatggctcgtcttggattgtttttggttttgatg
gggctgtggagatttagcgatgcttgccccgcatcctgcacttgcagcatctcaaggatt
gtttgtaatgattctgtaccagggatcgaggatttccctgtcctcacgttagacgacatg
gaaaacatcaccgagatatacattgctaatcaaaacaggctgtttgacatgaatgacaac
agtctgaggcactacataaacctcagaaacctaacagtgattaggacgagactgacgtct
atatcgtcagatgcgtttttcaacaatataagacttcaatatgtaaatctcagagacaat
aacctatcgacactgtcatggagaacatttcagaacttcaacacaacattcccgctcctc
ctgtctggaaaccctctggattgtgtttgcgagaacttgtggatcaaactgaggctccta
gaagaagctgacagtcaagacctgaaatgcatagatgagagagaagtgtcgaaggatctc
gccacactctctctaccagactgcgtgcttcccaaagtagaggtcaccccaaaaaacgtg
actgtgatgcaggggactgatgtcaaagctctgtgcacagcctcaggctcccctcctcct
gagatcgtgtggaaccttgattttctctctacccgctacgagactgatctttctgacatg
gagagcagcactatcgccttgtcaggcgtgtctcctgatgacaatgggaagatgatcaca
tgcagcgctgacaacatggtcggtcagacggaggcctccattctgctcaatattctcttt
gcccccacaatccagcagctgttggagccagagcaggaccaccactggtgcatcccattc
agcgtgacggggaaccccaagcccgagctgaagtggtaccacgagaacctacctctcgat
gagcaggactacatccgcaccatgatccacgtgtccatcaggagcgagtaccacggctgc
ctgcagctggtcaaccccacgcacatccacaacggcgtgtacaggctggtggcaaagaac
gagtacggccaggacgagaagaacatcttagccctgttcattgacccaccttatcctgac
catacagcagaagacctctatgactatcctactgagccgacaccccctccactggatgac
agtgttgcagtgtatgtagttgtgggaatcgccggagttgccttgaccggctgcgttctg
atggtgatcattctgaaatatggaagaaactccaagtttggtattaaaggctcctcctca
gtcatcagtaacgacgatgactctgccagccctcttcatcacgtttccaatggcaacaac
accccgtcgtcctcggagatgggtccagatgcagtgatcattggaatgacaaagattcct
gtcattgagaacccacagtacttccgtaactccggcagcatgctgaaatctgacacgttc
gtccagcacatcaagagacacaacattgtcctgaagcgggagctaggagagggagccttt
gggaaggtgtttctcgctgagtgctacaacctgacaccagaccaggagaagctccatgtg
gcagtcaagactctgaaagaggccaacgagagcggtcgagcggacttctacagagaagcc
gagctcctcaccaacctgcaacatgaacacatcgtcaccttttacggggtgtgtgtagag
agcgacccccttatcatggtgtttgaatatatgaaacacggtgacctaaacaagttcctc
aggtcccacggtcctgatgcggtgctaatggcagacggtcaacacagtatcctggtggag
ctcacccagtcccagatgctgcacattgcccaacagattgctgctggcatggtctacctg
gcctcccagcactttgtccacagagacttggcaaccaggaactgcctggtaggagaaaac
ctgctggtgaagataggagactttggcatgtccagagatgtttacagcacagactactac
agagtgggaggtcatacgatgctgccaatccgctggatgcccccagagagcatcatgtac
cggcggttcaccacagagagtgatgtgtggagcctcggcgtggtgctgtgggagatattc
acctacggcaagcagccctggtatcagctctccaacaatgaggtgattgagtgcatcacc
cagggccgtgtgctgcagcggccccgcacctgtcctaaagaagtgtacgacctgatgctg
ggctgctggcagagggagccctacatgaggctgaacatcaaggagatccacagcatgctc
cagagcctcgccaaggcctcgcctgtgtacctggacatactgggctga
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