Larimichthys crocea (large yellow croaker): 109142191
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Entry
109142191 CDS
T04659
Symbol
chad
Name
(RefSeq) chondroadherin
KO
K06248
chondroadherin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04510
Focal adhesion
lco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109142191 (chad)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109142191 (chad)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lco00535
]
109142191 (chad)
Proteoglycans [BR:
lco00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
109142191 (chad)
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GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRRNT
LRR_14
LRR_LRWD1
LRRCT
Motif
Other DBs
NCBI-GeneID:
109142191
NCBI-ProteinID:
XP_019130577
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Position
XVI:23438443..23443776
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AA seq
374 aa
AA seq
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MRCVSWLLLGTCLLVVGPAVQGVPGQCPSLCHCHGDLQHVICDNVGLKKIPRVSEVTRLL
NLQRNSLGTIPTGAFSESKGLISLHMQHCQLREIGSQAFKGLKKLVYLYLSMNEINNIKP
GAFEDLTELTYLYLDGNQISDLAKGIFSPMINLFILQLNDNKLRELRQGTFEGAKDLRWL
HMSGNELSTLQPGSLDDVENLAILHLDNNKMSTYPSVAMSKLRVVEELTLGKNPMRTIPD
NAFQSFGRYMEKLTLDNMGLEKFSDGAFTGVTAIKSLHLDNNKLKSLPRSLEYGTITNLT
LSNNPWSCTCQLAPLRRWMDSSRNRPDAVCASPAQQKGKQVRDSTALSGCRVKPKRAKKG
TRHWPSNAQPSRRR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcgtgagctggttgttgctggggacctgccttttggtcgtgggccccgcggtg
cagggagtcccgggccagtgccccagcctgtgccactgccacggcgacctacagcacgtc
atctgcgacaacgtcgggctgaagaagatccctcgtgtgtcagaggtcacccgtttgctg
aacctgcagaggaacagcctgggcactatcccgacaggggctttcagtgaaagcaagggg
ctcatctctctgcacatgcagcactgccagctccgagagatcggatcccaggccttcaag
gggctgaagaagcttgtctacctctacctgtccatgaacgagatcaacaacatcaaaccc
ggcgccttcgaggacctcaccgagctcacctacctctacctagatgggaaccagatcagc
gacctggccaagggcatcttctccccaatgatcaacctctttatcctgcagctcaatgac
aacaagctccgggagctgcgacaggggaccttcgaaggcgccaaagacttgcgctggctg
cacatgagcgggaacgagctgagcaccctgcagccgggctctctggacgacgtggagaac
ctcgctatacttcacctggacaacaacaagatgtccacctatcccagcgtggcaatgagc
aaactgcgagtggtggaggagctcacgctggggaagaaccccatgaggaccatcccggac
aacgccttccagagctttgggcgctacatggagaaactaaccctggacaacatgggtctg
gagaagttctctgacggcgcgtttaccggtgtgacggcgatcaagtcactgcacctcgac
aacaacaagctaaagtctctgcccagaagcctcgagtacggcaccatcaccaacctcacc
ctctccaacaacccatggagctgcacatgtcaactagctccactgcgcaggtggatggac
tcgagccgcaatcgtccggacgcagtgtgcgcttctccagctcagcagaaaggcaaacaa
gtcagagacagcaccgccctaagtggctgcagagtgaagccaaagagagccaaaaagggc
acgcgccattggccatcgaacgcgcagccgtccaggagacgctga
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