Larimichthys crocea (large yellow croaker): 109142541
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Entry
109142541 CDS
T04659
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
109142541 (gapvd1)
Membrane trafficking [BR:
lco04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109142541 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
109142541
NCBI-ProteinID:
XP_019132116
LinkDB
All DBs
Position
III:2302780..2332933
Genome browser
AA seq
1486 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNSDVLKTAERLYRAAWIAKQQRINLDRLIL
TSAEASPAECCQHAKMLEDTQFVDGYKTLGFQETIYGEFLARLRDNPRLVASCLVAGERL
NQEHTQGVIHTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERLTPAQQERFGEKGSE
GYKQRVQAAVEANEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQHLQQLAMADDDADPR
RKSSLSKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTAVYITHNQLLVLVDFVR
SVMAGDHLREEEHMALETLVANVPQNRTVKSNSLELTPSNTPQLSPATTPANKKNRLPIG
QHLAAITSWDPTATTLSAHIPLVTPFAAARSRSRTNIAQEGEAEASSQESLQELMPEEVL
VISLGTGPQTVPGMMSENEVLNLQMADGAQGDGHADDTKLHGKPDKTLRFSLCSDNLEGI
SEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEI
RDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSG
SVLLDPYGSTISETTSEAWSVEVLPSDSEAQDLKQEERLQELESCSGVGSTSDDTEVREV
SSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEESGHGAHHLTS
PPSQSDSLLAMFDPLSSGEGSSTGTIVRPKVHYARPPHPPPDPPIPEASALGPETRHSLF
TPHCLAQAELEHTKQRHSFPDRLVRSRSSDIVCPGRRPTSDPGLNRRVAVEERDPAGAFA
LGPSSSPSKDSLKGEVEDRKDSDDEKSDRNRPWWKKRFVSAIPKVLYWTAESDVPAPIAA
FRKRDKQEKDDIAQERVPQDDPMPRQSSQAQAAEDILDKYRNIKRTSPSDGAAGGASYDG
TGDLCVEDNVHDSPREDTLQNISTDDLPDSASQTAQQHDSKFSFSDAKKKLRLALCSADS
VALPIMAPATTRNGLPDHMDSEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVSRFD
ARTCRKLLAAIAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTV
CVRLLLEHMEAKMLDFIKAFQGCTAADDKTAAVEDFLRYLYGAMARDAIWQYASEDQLQD
AQMAIERSVMNRIFKLAFYPNQDGDILRDQLFHEHIQRLSKVVTANHKALQVPEVYLKEA
PWPSAQSEIRTINAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIR
ANPPCLLSTVQYINNFYASRLSGEECYWWMQFTAALEFIKTIDDRK
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcggctgtacgtg
gcgtcggagaagcagctgatccagaggctcaacagcgacgtgctgaagacggccgagagg
ttgtaccgggccgcgtggatcgccaagcagcagaggatcaacctcgatcgtctcattctc
accagtgccgaggcctctccggctgaatgctgccaacatgccaaaatgctggaggacacg
cagtttgtcgacggctacaagactctgggcttccaggagaccatctacggcgagttcttg
gccaggttgagggataaccccagactggtggcgtcgtgtctggtggcaggagagaggctg
aaccaggagcacacccagggggtcatccacacagtcttcacctcactctacggcaactgt
atcatgcaggaggatgagagctatttgctacaggtgttacgatacctgatagagtttgag
ctgaaggagagcgacaaccctcgccgtctactgcgacggggaacctgtgccttcagcatc
cttttcaagctcttctctgagggcctgtactcagccaagctcttccttactgccaccctc
cacgaacccattatgcagctgctggtggaagatgaagaccacctggagaccgacccagcc
aaggtgacggagcgcctcactccggcccagcaggagcgcttcggagagaagggctccgag
ggctacaaacaacgggtgcaggcggccgtggaggccaacgaagccaagctggtcgctttg
gtcaacaagtttatcggttacctgaagcagaacacctactgctttccccacagcctgcgc
tggatcgtgtcgcagatgtacaagactttgtcgtgcgtggagcgtctggaagtgggcgag
gtgcgcaccatgtgtacggacctgctgctgacctgcttcatctgcccagctatagttaac
ccagagcagtatgggatcatctcagatgcccccatcaacgaagtggcccgctttaaccta
atgcaggtggggcagcatttgcagcagttggccatggctgacgatgatgcagaccccaga
cggaaaagcagtttgtccaaatttgataagagctgcgtcgctgcctttctggacgtggtg
atcggaggaagagccgtcgaaactccacccatgtcctcgatgaacctcctggaaggcctc
agtcggaccgccgtctatatcacacacaaccagctgctcgtgctggtggactttgtgcgg
agcgtcatggcgggggaccatcttcgggaggaagagcacatggctctggagaccctggtt
gccaacgtgccccagaatcgaactgtgaagagcaacagtctggagctgactccctccaac
accccccagctctccccagccaccactcctgccaacaagaagaaccggctccccatagga
caacacttagcagctataacatcctgggaccccacagccaccactctgtctgctcacatt
ccattagtaaccccgtttgcagctgctcgcagccgcagccgtaccaacatagcccaggag
ggggaggcagaggccagctcccaagaatccctccaggagctgatgccagaggaggtgctg
gtgatttcactaggaactggtcctcagactgtccctgggatgatgtcagagaatgaggtt
ttgaacctgcagatggctgatggggcccagggggacggccatgctgatgatactaagctg
cacggtaaaccagacaaaaccctgcgcttctccctctgcagtgacaacttggaaggcatc
tcggagggtccatccaatcgctcaaactctgtgtcatctctggacctggagggagagtct
gtttctgaactcggagccggaccatcagggagcaacggggtggaggctctacagcttttg
gagcatgaacaggccaccactcaggacaacctggatgacaaacttcgcaagttcgagatc
agagacatgatgggtctgacggatgatcgcgacatctccgagacggtcagcgaaacgtgg
agcaccgacgtgctcggcagcgactttgaccccaacatggacgaagatcggctgcaggaa
atagcaggggcagctgcggagaacatgctcggcagcctgctgtgtcttcctggctcgggt
tcagtactgctggacccctatggctccaccatctcggagaccacgagcgaggcctggagc
gtggaggtccttcccagtgactcagaagcccaggacctgaaacaggaggagcgtctgcag
gagctggagagctgctcaggagtcggcagcacctcggacgatacggaggtcagagaggtc
agctcgagacccagcacaccaggcctcagtgtcgtctcaggcatcagtgcaacctcagaa
gacatccccaacaagatcgaggacctgcggtcagagtgcagctcagactttggagggaag
gactctgtgaccagtccagatggggaggagtcaggccacggagcacaccatctgacatct
ccaccttcacagagcgattccttactggccatgttcgatcccctctcctccggtgaaggc
tcctccaccggcacaatagtgaggcctaaagtgcactacgccagaccccctcaccctccc
cccgatcctcccatccccgaagccagcgccctgggcccggagacgcgccactctctcttc
acgccccactgcctggcccaggccgagctggagcacaccaagcagcgccactccttcccc
gacaggctggtccgcagccgcagctccgacatcgtgtgcccgggccgccggcccacaagc
gaccctggccttaaccggcgggtggcggttgaagagcgcgaccccgccggggccttcgcc
ttaggcccgtcctcgtcccccagcaaggactccctgaaaggagaggtcgaggacaggaaa
gacagcgacgacgagaagtctgatcgcaacagaccctggtggaagaaacgtttcgtgtca
gccattcccaaagtgctgtattggacggctgagagtgatgtcccagctccgatcgcggcg
ttcaggaaaagggacaagcaggagaaagacgacatcgcccaggagcgagtcccacaagat
gacccgatgcccagacaaagctctcaagcacaggcagctgaagacatcctggacaagtac
agaaacatcaagaggaccagcccgagcgatggagccgcaggtggagcttcttatgatggc
acaggagatctctgcgtcgaggacaacgtgcacgactctccccgagaagacactctgcag
aacatttccacagatgacctcccggactcagccagccagacagcgcagcagcacgactcc
aagttctctttcagtgatgcaaagaagaagctgaggttggcgttgtgctctgcagactcg
gtggctctgcccatcatggctcctgcaaccacacgaaacgggctgcccgaccacatggac
tctgaagacaatgagatcgtctgcttcctgaaggttcagctagcagaggccatcaacctc
caggataagaaccagatggcccagatccaggagaccacgcgctgtgtcagccgcttcgac
gcacgcacctgcaggaagctgctggctgccatcgccgaggattacagaaagcgggcaccg
tacatagcgtatctaaccaggtgtcgtcagggcctgcagacctcgcaggcccatctggag
aggctcctccagagggtgctgagagacaaggaggtggctaaccgctacttcaccacggtc
tgcgttcggctcctgctcgaacacatggaggccaagatgctcgacttcattaaagcgttc
caggggtgcacagcagcggatgacaagacggcagcggtggaggattttctgcgctacttg
tacggtgccatggcccgcgatgccatttggcagtacgcgagcgaggaccagctgcaggac
gcccagatggctatcgagcgcagcgttatgaaccgcatcttcaaactggccttctacccc
aaccaggatggagacatcctcagagaccagcttttccacgaacacatccagcggctctcc
aaagttgtgacggccaatcataaagctcttcaagtcccggaggtttacctgaaggaggcc
ccctggccctccgcgcagtctgagatcaggaccatcaacgcgtacaagacgccacgagac
aaagtgcagtgtatactgcgcatgtgctccaccatcatgaacctcctcagtctggccaat
gaagactctgtccccggggcggacgacttcgtccccgtgctcgtctttgtcctcatcagg
gcaaacccgccctgcctgctgtccaccgttcagtacatcaataatttctatgccagccgg
ctgagtggggaggagtgctattggtggatgcagttcaccgcggcgctggaattcattaag
accatcgacgatcgcaagtga
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