Larimichthys crocea (large yellow croaker): 109142862
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Entry
109142862 CDS
T04659
Name
(RefSeq) syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
109142862
Membrane trafficking [BR:
lco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109142862
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
109142862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Lgl_C
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
WD40_Prp19
Synaptobrevin
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
109142862
NCBI-ProteinID:
XP_027130747
LinkDB
All DBs
Position
XXIV:2020219..2050540
Genome browser
AA seq
1360 aa
AA seq
DB search
MWNKAIELQPGNSDTQKECACRYRAENAAAPAGGPTVARRGPFMVLSGGLSYDTVGRRAC
LTVMHGKSTAVLEMDYPIVDFLTLCGNSVSKRLAATTPPWWTMVPIFENPYPLTIHESPV
TCCEYFADCPAELIPALYSVGSRQKRQGYSKKECPSVAETGARHSELPRDHSPPGGEPDP
TPPTPEFLEPSGERSLPQPSTGSISSDGPRDNNTVRHGFPYQPSSMAFDPVQKILAVGTQ
AGALRLFGRAGVECYCQHESGAAVIQLQFLINEGALVSALADDSIHLWNLRQKIPAILHS
LKFNRERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVIMWNKAIELSTKTHPGP
VVHISDNPMDEGKLLIGFECGVVVLWDLKCKKADYRYNYDEAIHSVAWHHEGKQFVCSHS
DGTLTTWNVRAPAKPAQIITPHGKQPKDGKKPEPCKPILKVEYKTTRAGDPFMVLSGGLS
YDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYAVVVLLEKDLVVID
LGQIGYPIFENPYPLTIHESPVTCCEYFADCPAELIPALYSVGSRQKRQGYSKKEWPVSG
GNWGQGTQSYPEIIVTGHADGTIKFWDASALMLQVLYKLKTAKVFERARGKEEKPSTDIV
EEDPFAIQTLSWCPESRMLCVAGVSAHVIVYRFSKQEVTTEVVQLLEVRMQCEFSDGDSP
DPGGEQTPTPPTPGASSSPQESDPLPQPSTGSISSDGPRDNIPCLQVRSSPLKQSPGYQV
ELVIQLVWVSGEPPQPITSLAINSSYGLVVFGNSNGLAVVDYLQKTLLVNMGTSELYSPS
DPYQRQPRSPRKQRQPSGALCDSNDGSNASEDRCKSPTSGSTSPCNSDDDRKQNFIEKVK
FKSRRFSKTVANDFAKMSRKISSSSEQKPDHEERFRRRRSLASKKRFCYVKEGKAPAPAV
MSLKEGLCRSMSAPPVSSHAKDNSFTRSRSSSVTSIDRESREAISSFHFCESFPRKTDNL
VSPCLLVGTTQGSVMMVALSLPPGGGDQRLQQMVGISSCGTLVSLKGGILTMALLDATGA
LLPPSYEPWYDPNASDEEKEKEKSRRRRPASPPASQEGQEGQFAVLCSEKQAKVVAMPSQ
TRIYKHNITETSFVLRADVVQMAGANCIACFCANGHIMTLSLPSLRPLLDVNYLPLTDMR
IARTFCFSNLGQALYLTSATEIQRITYSQETCDNLQEMLSELFTPVETPEAPNRGFFKGL
FGGGAQSLDREDLFGETAAGKASRSLAQHIPGPGGMEGMKGAASGVVGDLARARIALDER
GQKLGELEERTAAMMASAESFSKHAHDMMLKYKDKKWYQL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacaaagccatcgaacttcaaccaggaaactctgacacgcaaaaggaatgcgcg
tgcagatatcgcgcggagaacgccgcagctccggccggtggcccgacggtggcacggagg
ggaccgtttatggtcctgtctggaggcctgtcttacgacacagtggggaggagagcctgt
ctgaccgtgatgcatggaaagagcactgccgtcctggagatggactaccccatcgtagat
ttcctaacgctgtgtggaaactccgtatccaaacggttggccgcgaccacgcctccgtgg
tggacgatggtaccgatatttgagaatccgtatcctctgactatccacgagtcgccggtg
acctgctgcgagtacttcgccgactgccctgctgaacttatccctgcactttactccgtc
ggcagccggcaaaagagacaaggctacagcaagaaggagtgcccgtcagtggcggaaact
ggggccaggcactcagagttacccagagatcatagtccaccgggaggggagccagacccc
acaccgcccaccccggagttcctcgagccctcaggagagcgatctctccctcagccatcc
acaggcagcatctcctccgacggaccccgggacaacaacaccgtgcgtcatggcttccca
tatcaaccatcctccatggcttttgaccccgtgcagaaaatcttggctgtcgggactcag
gctggagctttgaggctcttcggccgtgcgggcgtggagtgctactgtcagcacgagagc
ggggcggccgtcatccagcttcagttcctgatcaacgagggggcgctggtgagtgcctta
gctgacgacagcatccacctgtggaacctgaggcaaaaaatccccgccatcctgcattct
ctcaagtttaacagggagagaatcacatactgccacctgcccttccagagcaaatggctt
tacatcggcacggaaagaggaaacatccacatcgtcaacgtggagtccttcactctctca
ggctacgtcatcatgtggaacaaagccatcgaactatccaccaagacacacccagggccc
gtcgtgcacatcagcgataaccccatggacgaaggaaagcttctgattggcttcgagtgc
ggcgtggtggtgttgtgggatttgaagtgcaaaaaggctgactaccgctacaattacgat
gaggcgatccactcggtggcctggcatcacgagggtaaacagtttgtttgcagtcactct
gatggcactctgaccacatggaatgtacgagctccagccaagcctgcacagatcatcacg
ccgcatggaaagcagcccaaggatggaaaaaagccagaaccatgcaagcctatcctgaaa
gtggagtacaaaacaacaagggctggggacccgttcatggtcctgtctggaggcctgtct
tacgacacagtggggaggagagcctgtctgaccgtgatgcatgggaagagcactgccgtc
ctggagatggactaccccatcgtagatttcctaacgctgtgtgaaactccgtatccaaac
gactttcaggagccttacgccgtcgtggtcctcctcgagaaggatttagttgtaatagac
ctcggacagatcgggtacccgatatttgagaatccgtatcctctgactatccacgagtcg
ccggtgacctgctgcgagtacttcgccgactgccctgctgaacttatccctgcactttac
tccgtcggcagccggcaaaagagacaaggctacagcaagaaggagtggcccgtcagtgga
ggaaactggggccaaggcactcagagttacccagagatcatagtcaccggacatgctgat
gggacgattaaattctgggatgcctctgcattaatgcttcaagtgctgtacaagctgaag
actgccaaggtgtttgagcgggcccgcggtaaggaggagaaaccaagtacggatatagta
gaagaggacccgtttgccatccagaccctgtcctggtgccctgagagcaggatgctctgc
gtggccggggtgtccgcccacgtcatcgtctataggttcagcaaacaagaagtcaccact
gaagttgtgcagcttttggaggtgcggatgcagtgcgagtttagcgacggagactctcct
gatccaggaggggagcagacccccacaccgcccaccccgggagcttcctcgagccctcag
gagagcgatcctctccctcagccatccacaggcagcatctcctccgacggaccccgggac
aacataccctgcctgcaggtgcggagctccccgctgaagcagtctccgggctaccaggtg
gagctggtgatccagctggtgtgggtgagcggggagcctcctcagccaatcaccagcctg
gctatcaactcctcctacggcctcgtggtgtttggaaacagtaacggtctggctgtggtg
gactacctccagaaaactctcctcgtcaacatgggcacatccgagctgtacagcccgtct
gacccctaccagaggcagcctcgctccccgcgcaaacaacggcagccctctggagcactc
tgcgactccaacgacgggtccaacgcctcagaggaccgctgcaaatcaccaacttcagga
tctacctcaccttgcaattcagatgacgatcgcaaacagaacttcatagagaaggtgaag
ttcaaaagcagacgcttttccaagacggttgccaatgactttgccaagatgtcgaggaaa
attagctcgtctagcgagcaaaagccagaccatgaggagaggttccgacgtcggcgctct
ctcgcgagcaagaagcgcttttgttatgtgaaggaaggcaaggcgccggcgccggccgtg
atgagcctgaaggagggcctctgtagatctatgtcagcccctcctgtgagctcccatgcc
aaggataactcattcacccgctcgcgtagctcgagcgtgaccagcatagaccgagagtct
cgagaggccatctcctcctttcacttctgcgagagtttccccaggaagacggacaacctg
gtcagcccctgtctgctggtgggaaccacgcagggctccgtgatgatggtggccctcagc
ctgccgcccggtggtggggaccagaggctacagcagatggttggcatctcctcctgcggc
acgctggtcagtctcaaaggaggcattctgaccatggccctgctggacgccactggagct
ctgctgcccccttcctacgagccgtggtatgacccgaacgcctcggacgaggagaaggag
aaggagaagagcaggaggcgcaggccggcctcccctcccgcgtcacaagagggtcaagag
ggccagtttgccgtgctgtgttcggagaagcaggccaaggtggtcgccatgccctcccaa
acgcgcatctacaaacacaacatcacggagacctccttcgtgctgagggccgacgtcgtg
cagatggccggagcgaactgcatcgcctgtttctgcgctaacgggcacatcatgactctg
agtttacccagtctaaggcctctgctggacgtgaactacctgccgctgacagacatgcgt
atagccagaacgttctgcttctctaacctgggtcaggccctatacctcacctccgccacc
gagatccagaggatcacgtacagccaggagacctgcgataacctgcaggagatgctcagt
gagttatttacccctgtggagacaccagaggctcctaacagaggtttcttcaaaggcctt
tttggtggaggagctcagtctctggacagggaggacctctttggcgaaacagctgctggc
aaggcctcccgtagcctggcccaacacatccccggcccaggcggcatggagggaatgaaa
ggcgcagcctccggggtcgtgggagacctggcccgcgctcggatagctctggacgagaga
gggcagaaactaggcgagctggaggaacgaacggcagccatgatggccagcgcggagtcc
ttttccaaacatgctcatgatatgatgctgaagtacaaagataagaagtggtaccagctc
tga
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