Larimichthys crocea (large yellow croaker): 109142867
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Entry
109142867 CDS
T04659
Name
(RefSeq) tudor domain-containing protein 6
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
109142867
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109142867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Agenet
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
109142867
NCBI-ProteinID:
XP_019133410
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Position
XXIV:2175557..2183444
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AA seq
1720 aa
AA seq
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MCSIPGLPTPGSKVPVVVTRVNLNPSCGLVELWVNMDYGREHIYEQMREDIQIPKRKFCG
LEGKPRDLCLVCISDTWHRARIVSIQSETYNVFLIDQGQPHIAKSENLAWGQSDSFLLPP
ETQSCILANVLSHENNWPERATRLLMSLPGKKIEGLVQHVLMPDRIILLDIPDVSKYICK
CGVAKKIPMDEFKCLVLKCLHLPKGEDSEAYHITQEQDLKLSCQLEKHDQYFYPELLTDT
FETVIVTEVTSPQNIFCKLLIFSKAVKILSEQIHQHYEKSSDLGEAKPQNCWDPCAARDR
NGRWQRSLLKQNMTSDGAVEVLHVDEGITELVPVGDIKPLHGKFLRMPVVTYTCSLDGLK
DDSTEWTTEQTDYLKSLLLHQTVEACFNQHNIPQDVYYVTLYAENASCINNSFIEKGRPC
KNEPIPPLFFSSLEDKPCIDIQNKICVNVDGLLEETLSNIANVEASDRTDDVPTSGADGS
ERPDFLGQRNGYHSAGFPSEVQKPCDDGVFTVGRSVDVNVSCIESLQRFWCQITENGDTL
RLLMQNLQDQYASTHPQPLVESVCVARNPDDGMWYRARIIASQHSPVVDVRFIDYGLTRK
VPLRDVRPIDPAFLQLNAQAFHCCLSNLKDSTSPTAVTWTNSALMENFVDFSASSNIGLK
CIVKAVMSDEEGLQLNVVDIETPSEGACKLLAQRSAQDESHVPVPPQISSDAYSYPTHNI
EVGGKEKVWVTFSESVNHFYCQLERNSHLFEKVMANVQQLIGQPQGTDHPLGVNMICFVR
YTDNKWYRGQVVETSPKLRVFFVDYGQTLVVNESDVCPIPTEASIVRSVPVQAVPLGLFS
VPAQVPEKVNKWFADHAIDSSLTISVLAKGAKGKLFVELFDGSLNVNVKVTEMISQMMGQ
TMTGLVQRTDQQLCINTKHASVPNEHCLMQEPMDVSLTRMAEQNEVHSSNEMHELKMSPQ
SIANASAQENKQGNTSTLDEQRNLSLDVILEYEETVSAETFIQGGHSDLETTQLSLPLCP
EENVNCMYKRPDISLNKTEEVYASCIVEPHYFWCQYTNTEGLSMVSRLAQEEGWSQKDIP
ERFFKTLGPGSSCLAVFSSDNQWYRAQVIRRTDDILHVLFVDYGNECDVDIKNVRPLSQS
LLEKAPQAFLCSLNGFGESKGSWDDGVYDDFYNLLVDKPLRVRVFNMEDHSEIAVPQYAV
QVEFENMVVNEMMQKYWKPAATDQNKTETLQTEHLLQEGQIESNMTQLNVSKGNVNTCMY
KKPNLSKNKKVEVYASCIVEPHYFWCQYANAEELNEVTRLAQEAGQAQQDIMFTKTRVHK
TLGPGGPCLALFCSDEQWYRAQVINRVDDSFHVVFIDYGNESDVDLKNVRPLSQNLLDNA
PQAFLCSLNGFDKSRGSWVDEVYEDFYSLLVDKPLKLTVFSMEDHSEILTHQHAVEIECE
GVDVNAAMQKYWKPVAKERVLIESPQRETFQQDGQTDANMTEHVMLENPQTEDLTQSGQT
ESEIKHLNVNTCMYKKPNLSKNKTEMVYASCIVEPHFFWCQYANTEELNEVSGLAQGAGQ
AQEDTMFTKTLGPGSPCLALFSSDNQWYRAQVIRRLDDAFCVLFIDYGNESDVDIKNVRP
LPQSLLDKAPQAFLCSLNGFDKSEGSWDDQIYNDFYNLLVDKLLKLTVLNMDSHSEIAVP
QYAVEIECEGVVVNAQMEKYWKGLDTETSVGSALDPDEYP
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcgattcccgggcttccaacgccaggatcaaaagtacctgttgtcgtcacgagg
gttaatctaaaccccagttgtggtcttgtggaactatgggttaacatggattatggaagg
gagcatatttatgagcagatgcgagaagacattcaaattcctaaaaggaagttttgtgga
ctagaaggaaaaccgagggacctctgtctagtttgcatcagtgatacctggcatagagct
cggattgtatcgattcagagtgaaacttacaatgtttttctaattgaccagggacagccc
catattgccaaaagtgaaaatttagcctggggtcaaagtgacagttttctccttcctcct
gaaactcaatcatgcatacttgcaaatgtcctctcccatgagaataactggcctgaaaga
gccacaaggcttttgatgtctctgcctggcaagaagattgagggactggtccaacatgtg
ctaatgccagacaggatcattctccttgacataccagatgtttccaagtacatttgtaag
tgtggagttgcaaagaagataccaatggatgaatttaaatgtcttgtactgaaatgtctt
catttacccaaaggagaggactctgaggcctaccacataacgcaggaacaggatctgaag
cttagttgccaacttgagaagcatgaccaatatttttacccagaactgttaactgacact
tttgaaacagttattgtaacagaggtaacaagtccacagaatatattttgcaaactccta
attttttccaaagcagtgaagatattatctgaacaaatccaccagcactatgaaaagagc
tcagatttaggagaggcaaaaccacagaactgctgggatccatgtgctgctagagaccga
aatggcagatggcagcgctcgttacttaagcaaaacatgactagcgacggtgctgtggaa
gtcttgcatgtggatgaagggataactgaattagtcccagttggagacatcaaaccactg
catggaaagtttctgagaatgccagttgtcacatatacctgttcacttgatggcttaaaa
gatgacagcacagagtggactacagaacagacggactacttgaagtcactgctcctgcac
cagactgtggaggcctgttttaaccagcataatatacctcaagatgtctattatgtcact
ctctatgcagaaaatgcttcatgcataaacaattcttttatagagaagggaagaccttgt
aagaatgaacctattccgccactattcttcagttcacttgaagacaaaccatgcattgat
atacagaacaaaatctgtgtaaatgttgatggtttactagaggaaactttgtcaaacatc
gcaaacgtagaggccagtgacaggacagatgatgtacccacttctggtgcggatggctca
gaacgtccagactttctaggacagcgcaatgggtatcattcagcaggtttcccctctgag
gtccagaagccttgtgatgatggtgtgtttactgtaggccgcagtgtcgatgtaaatgta
tcttgcattgaaagtctacagaggttctggtgtcaaataacagaaaatggtgacactctt
cgactccttatgcaaaacctgcaagaccaatatgcgtccactcaccctcagccgctcgtt
gagtctgtctgtgttgcccgaaatccagacgatgggatgtggtacagagcaaggatcatt
gcaagtcagcactccccagttgtagatgtgagatttatagactatggcctaactagaaaa
gtccctctgcgagatgtgcgccccattgatccagctttcttacagctgaatgcacaggca
tttcattgttgcttatcaaatctgaaggattctactagtcccactgctgtcacttggact
aactctgcattaatggagaattttgtcgatttcagtgcatcgtccaacattgggttgaaa
tgcattgtaaaagctgtaatgtctgatgaagaaggtctgcagcttaatgtggtagatatt
gaaacaccatctgaaggtgcatgcaagcttctggctcagagatctgcacaggatgaatct
catgtgccagttcctccacagatctcatcggatgcatacagttaccccacacacaatatt
gaggtgggcggaaaagaaaaagtgtgggtaaccttttcagagagtgtgaatcacttctac
tgccaactggagaggaattcacatttgtttgagaaagtgatggcaaatgttcaacaactc
attggacagccacagggcacagatcacccacttggagttaatatgatttgctttgtaagg
tacactgataataagtggtacagaggtcaagttgtagaaacgtctccaaaacttagagtg
ttctttgtggactatggtcaaacccttgtagtgaatgaatctgatgtttgccccattcca
actgaagcaagcatcgtcaggtctgttcctgtgcaggctgttccacttggactgttcagt
gtccctgcacaagtgccagagaaggtcaacaagtggtttgcagatcatgctattgactcc
agtttgaccatttctgtgttagcaaaaggggcaaaagggaagctatttgtcgaactcttt
gatggatctctaaatgtaaatgtgaaagttacagagatgatatcacagatgatgggacaa
acaatgactggtctcgttcagaggactgaccagcagctctgtatcaacacaaaacacgct
agtgtgccaaatgaacactgtttaatgcaagagccaatggatgtgtcattaacaaggatg
gcggaacaaaatgaggtccacagcagcaatgaaatgcatgaactaaagatgagtccacaa
tccattgctaatgcatctgcacaagagaataaacaaggaaatacttcgacactggatgaa
caaagaaatctatctttggatgtcattcttgagtacgaagaaaccgtgtctgcagaaact
ttcatacaaggtggccacagtgacttggaaactacacaactttcccttcccctttgccct
gaggaaaatgtgaactgcatgtacaagaggccagacatttctctaaacaagacagaggag
gtatatgcttcctgcattgttgaaccacattacttttggtgtcagtacacaaacactgaa
ggcctgagcatggtgtcgaggcttgctcaggaagaaggatggtcacaaaaggacataccc
gagaggtttttcaagactcttggtcctggtagttcatgccttgctgttttttccagtgac
aaccagtggtatcgagctcaggtaattcggagaactgatgatatacttcatgttctgttt
gttgactacggaaatgagtgtgatgttgacatcaagaatgtgagaccactgtctcagagt
ctgcttgagaaggctccacaggcctttttgtgctctttaaatggatttggtgagtccaag
ggctcctgggacgatggtgtttatgatgacttctacaatcttctggttgataaaccactc
agagtaagagtcttcaatatggaggaccattcagagattgcggttcctcaatatgcagtg
caagtagagtttgagaatatggttgtaaatgagatgatgcagaaatactggaaaccagct
gccacagaccaaaataagacagaaaccctgcaaacagaacatttactccaggaaggtcaa
attgagtccaacatgacgcagcttaatgtttccaaaggaaatgtgaacacttgcatgtac
aagaaaccaaacctttccaaaaacaaaaaagtggaagtatatgcttcttgtattgtggaa
ccacattacttctggtgtcagtacgccaacgctgaggagctcaatgaagtaaccaggctt
gctcaggaagcaggacaggcacagcaggacataatgttcacaaagacacgtgttcacaag
actcttggtcctggcggtccgtgccttgctctattttgcagtgatgaacagtggtatcga
gctcaagtaattaacagagttgatgattcattccatgttgtgtttattgactatggaaat
gagtctgatgttgacctcaagaatgtgagaccactgtcccagaatttgctggataatgct
cctcaggcctttttgtgctctttgaatggatttgacaagtccaggggttcatgggttgac
gaagtgtacgaggacttctacagtcttctggttgataaacccctcaaactaacagtgttt
agcatggaagaccattcagagatcttaactcatcagcatgcagtggaaatagagtgtgaa
ggagtggatgtaaacgcagcaatgcagaaatactggaaaccagttgccaaagaacgtgtt
ttgatagaaagcccacaaagagaaaccttccagcaagatggtcaaactgatgccaacatg
acagaacatgttatgttagaaaaccctcaaacagaagacttaacccagagtggtcaaact
gagtccgaaataaagcatcttaatgttaatacatgcatgtacaagaagccaaacctttcc
aaaaataagactgagatggtgtatgcctcttgtattgtggaaccacatttcttctggtgt
caatacgccaacactgaggagctcaatgaagtatccgggcttgctcagggagcaggacag
gcacaggaggacacaatgttcaccaagactcttggtcctggcagcccatgtcttgctctg
ttttccagtgacaaccagtggtatcgagctcaagtaatccgcagattggacgatgcattc
tgcgttctgtttattgactatggaaatgagtctgatgttgacatcaagaatgtgagacca
ctgccccagagcctgctggataaggctcctcaggcctttttgtgctctttgaatggattt
gataagtcagagggctcctgggatgaccaaatctacaacgacttctacaatcttctggtt
gataagctactcaaactgactgttctcaacatggacagccattcagagattgcagtccct
caatatgcagtagaaatagagtgcgagggagtggttgtcaatgcacagatggagaaatac
tggaaaggactggacacggagaccagtgtgggatcagctctggacccagatgaataccca
tga
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