Lysobacter capsici: LC55x_0258
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Entry
LC55x_0258 CDS
T04162
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_0258
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_0258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ALN83563
LinkDB
All DBs
Position
260202..262970
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AA seq
922 aa
AA seq
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MPHAILSHAIARALFAAAIVGVAPVAAHAQDAAQPTTLDRVEVTGSNISRGDMETASPVQ
VVTRAEIDRTGKASIAEYLQTLTTDGAGTIPKTFGTGFAGGGSGISLRGLGAGSTLVLLN
GRRTAPYGLADDGQKVFTDLSTIPMDAVERVEVLKDGASAIYGSDAIAGVVNIILRKEFT
GVTVRSSYGVSGEGDGQQAKASATFGFGNLSEDRYNVFFNIEASQTDEIQVADRADRKWI
GTGDARRWGYSQTKRFMNGFILGADADGSPVGNVKNPVSGQYMSLPGCEKFSTIPQTDPG
GGCLWQAGQFNSLTPEEKYVNLFGRATFVLSDNFEAYVEAGYSKKKNTFVNTPSDASGAW
GYPGGPVNGDSGDGAVVLGPNHPDNPFPGQAANLRYTAFDVGPRVIRTDSEFSRFLAGVK
GTAGAWDVDVAYLHSQSDLTNTRDGFLRYSAVRDALTNGTGPGGYWRLGQNANLNSQALY
DYISPTIHADGKTTLDLFDVKGSRSLMDLKGGALGVAFGAEWRRQKAELKPQTYTDAGDI
IGLGYSAYEGTQEVAAGYAEIVAPVLESLELSGAVRYDSYKGGDSATTPKFGVKWSPLKQ
LSLRATYAEGFRAPNPAESGKGGLAGFTAAADPVRCPGGNPAPGGSVRDCDIQIAVITSP
NPDLKPEESKSYTVGLVFEPTASTTVTLDGWQIKRTNEINVETTDAAIAAGKVIRSDNNL
PGQANTGTLLAALANYVNSASTTVRGIDLDVRQGFDLDSAGKLNLDLQWSHITTFEREEL
DGSSLEFAGTHGNCDVTNCIGTPKDRINFGATWELGNWSLSGVVNYIASFKNVRAEGDVC
ASRYADGSPAPGGCRIPSFTTVDLSSRWKAKDGVEVFGSIQNLTDKIAPLDPLTYGAINY
NPMHSSGAIGRYFTVGVKYNFQ
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacgccatcctcagccacgccatcgcacgcgcgctgttcgccgccgccatcgtc
ggcgtcgcgcccgtcgcagcccatgcgcaggacgcggcgcaacccaccaccttggatcgg
gtcgaagtcaccggttccaacatcagccgcggcgacatggaaaccgcctcgccggtgcag
gtggtcacgcgcgcggaaatcgatcgcaccggcaaggccagcatcgccgaatacctgcag
acgttgaccaccgatggcgcgggcacgattccgaaaaccttcggcaccggtttcgccggc
ggcggttcgggcatttccctgcgtggcctcggcgcgggctcgaccctggtgctgttgaac
ggacggcgcaccgcgccctacggcttggccgacgacggccagaaagtgttcaccgacctg
agcacgattccgatggacgcggtcgaacgcgtggaagtgctcaaggacggcgcctcggcg
atctacggctccgacgccatcgccggcgtggtcaacatcatcctgcgcaaggaattcacc
ggcgtcaccgtgcgcagttcctacggcgtatcgggcgagggcgacggccagcaagccaag
gcctcggcgacgttcggcttcggcaatctgagcgaggaccgctacaacgtcttcttcaac
atcgaagccagccagaccgacgagatccaggtcgccgaccgcgccgatcgcaagtggatc
ggcaccggcgacgcgcgtcgctggggctacagccagaccaagcgtttcatgaacggtttc
atcctcggcgccgacgccgacggttcgccggtgggcaacgtcaagaatcccgtcagcggc
caatacatgtcgctgccgggctgcgagaagttctcgactattccgcagaccgatcccggc
ggcggctgcctgtggcaggccggccagttcaacagcctgaccccggaagagaagtacgtg
aacctgttcggccgcgccaccttcgtgctgtcggacaacttcgaggcctatgtggaagcg
ggctattcgaagaagaagaacaccttcgtcaacacgccgtcggacgcgtccggcgcgtgg
ggttatccgggcggtccggtcaacggcgattccggcgacggcgcggtcgtgctggggccg
aatcatccggacaatccgttccccggccaggccgcgaatctgcgttacaccgcgttcgac
gtcggcccgcgggtgatccgcaccgacagcgaattcagccgcttcctggccggcgtcaag
ggcaccgccggcgcgtgggatgtcgacgtggcctacctgcattcgcaaagcgatctgacc
aacacccgcgacggtttcctgcgctacagcgcggtgcgcgacgcgctgaccaacggcacc
ggccccggcggctattggcgcctgggtcagaacgcgaacctcaattcgcaggcgctgtac
gactacatctcgccgaccatccacgccgacggcaagaccaccttggatctgttcgacgtc
aagggctcgcgttcgctgatggacctcaagggcggcgcgctcggcgtcgcgttcggcgcc
gagtggcggcggcagaaagccgagctcaagccgcagacctacaccgacgcgggcgacatc
attggcctgggttattcggcgtacgagggcacccaggaagtcgcggccggttacgccgaa
atcgtcgcgcccgtgctcgaaagcctggagctgtccggcgcggtgcgctacgacagctac
aagggcggcgacagcgcgaccacgccgaagttcggggtgaagtggagcccgttgaagcag
ttgtcgctgcgcgcgacttacgccgaaggtttccgcgcgccgaacccggccgagtcgggc
aagggcggcctggccggcttcaccgccgcggccgacccggtgcgttgcccgggcggcaac
cccgcgccgggcggcagcgtgcgcgattgcgacatccagatcgcggtgatcaccagcccc
aatcccgacctcaagcccgaggagtcgaagagctacaccgtcggcctggtgttcgaaccg
accgccagcaccacggtcaccctcgacggctggcagatcaagcgcaccaacgagatcaac
gtcgagaccaccgatgctgcgatcgccgccggcaaggtgatccgcagcgacaacaacctg
cccggccaggccaacaccggcaccttgctcgctgcgctcgccaattacgtcaactcggcc
tcgaccaccgtgcgcggcatcgacctggacgtgcgccagggcttcgatctggattcggcc
ggcaagctcaacctcgatctgcagtggagccacatcaccaccttcgagcgcgaggaactc
gacggcagttcgctggagttcgccggcacccacggcaactgcgacgtgaccaactgcatc
ggcacgcctaaggaccggatcaacttcggcgcgacctgggagctcggcaactggagcctg
agcggcgtggtcaactacatcgccagcttcaagaacgtgcgcgccgaaggcgacgtgtgc
gccagccgctacgccgacggcagccccgcgccgggcggttgccgcattccctcgttcacc
accgtcgacctgtccagccgctggaaggccaaggacggggtggaggtgttcggttcgatc
cagaacctgaccgacaagatcgccccgctcgacccattgacctacggcgcgatcaactac
aacccgatgcattccagcggcgcgatcggccgctatttcacggtcggggtgaagtacaac
ttccagtaa
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