Lysobacter capsici: LC55x_0287
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Entry
LC55x_0287 CDS
T04162
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_0287
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_0287
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
OMP_b-brl_3
Phage_tail_C
Motif
Other DBs
NCBI-ProteinID:
ALN83592
LinkDB
All DBs
Position
292762..295821
Genome browser
AA seq
1019 aa
AA seq
DB search
MVRRLRVLLLSLACTAALSAQAQVAAGAVDIPAGDLVSALDALARQSGVQFVYRADQLKG
LRTSGVRGAMPAADALDRLLRGSGYVARRDASGAMVIVQAPKPAPAPRTPPASGGASAEP
ASVTELESIQVTGSRIPRAQIEGPAPITVMTAQEIKANGFTSVPDVLRAMTQNGGETQSQ
QSASGADFSPGAQQVDLRGLGPNHTLVLVNGRRIADFPMPFKGRSNFTDISNIPLGMVER
IEILTGSASAIYGSDAISGVVNFILKKQADGTTVDFRMGDSTRGGGESFDLSVSSGYSNE
RFSAIYGFELQAQNPLWAYERARQDSTKDAPTQSTRAARRAFLRTNFDDEYLDPGAACAG
LAQLNGGTTYRASRPGWGADGEDGYYCGSDESIGYGTMISKRKGVNAFASLGYRFDNGSE
WFADVQMGYHELSMFRDVSSWSYQAPDGNEDGYFFNQATDQVEYWQRQFSPEEMGGLDAG
TIRNRQKTLSLTTGFKGRWGELWDWEAALSHSQYQSTISWPQIVASKANDLFLGPQLGSD
DDGLPIFNADPERLYRPLTRAEYDAIAARTVYQPKSRTDTASLTLTNTELFTMPAGAVGF
AGTLEVGNQSYNLRPDPLATQYYYYSWRDSDGKGSRDRWAAAGELRLPLLEKLNLSVAGR
YDQYRYGGHDIDKFTYSAGLEWRPVESLLLRGSYGTAFRAPDLHYVFSGEGNLESFGADY
YRCRTEEPDSDLGDCSYSDENLVVTRRGNRELEPETSTAWTAGLVWSPMANLDFSIDYFN
IELRQQVQDLRIDGILQDEANCRLGRRPDGSTVDAASPTCVDALARVGRNDDGDLYSIYI
NPINIARERTNGIDFNARYHLETRFGSFRFNGNYSWVREHESQQYSGDPVEDQFAVNSGF
DIPRSKASVSLSWDKDRWTTTLHGERLGKLPNYDSYNQSYDPDDGGSAWVGATYRYNASV
QYRFTDHAQLSLAVTNLFDKLPPKDATYTSYPYYDVSWFDTVGRQVYLQYTHKFGGSAL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtcgtctgcgcgtgttgctgttgagtctggcctgtaccgccgcgctgtcggcg
caggcgcaagtcgccgcgggggcggtcgacattccggccggcgatctggtttcggcgctg
gacgcgctggcgcggcaatcgggggtgcagttcgtctaccgcgccgatcagctcaagggc
ctgcgcacctcgggcgtgcgcggcgcgatgccggccgccgatgcgctcgaccgcttgctg
cgcggcagcggctacgtcgcgcgtcgcgatgcgtcgggggcgatggtgatcgtgcaggcg
ccgaagcccgcgcccgcgccgcgcacgccgcccgcgagcggcggcgcttcggccgaaccg
gcctcggtgaccgaactggaaagcatccaggtcaccggctcgcgtattccgcgcgcgcag
atcgaaggcccggcgccgatcacggtgatgaccgcgcaggagatcaaggccaacggcttc
accagcgtgcccgacgtgctgcgcgcgatgacccagaacggcggcgagacccagagccag
caatcggccagcggcgcggacttctcgcccggcgcgcagcaggtcgacctgcgcgggctc
ggccccaaccacaccctggtgctggtcaacggccgccgcatcgccgactttccgatgccg
ttcaagggccgcagcaatttcaccgacatctccaatatcccgctgggcatggtcgagcgg
atcgaaatcctgaccggcagcgcctcggcgatctacggctcggacgcgatctccggcgtg
gtcaacttcatcctcaagaagcaggccgacggcaccaccgtggatttccgcatgggcgac
agcacccgcggcggcggcgagtcgttcgacctcagcgtgtccagcggctacagcaacgag
cgtttcagcgcgatctacggcttcgaactgcaggcgcagaacccgttgtgggcctacgag
cgcgcgcgtcaggattcgaccaaggacgcgccgacgcagtcgacgcgcgcggcgcggcgc
gcgttcctgcgcaccaacttcgacgacgaatacctcgatccgggcgcggcctgcgccggc
ctggcccagctcaacggcggcaccacgtaccgcgcctcgcgtccgggctggggcgccgac
ggcgaggacggctattactgcggaagcgacgagtcgatcggctacggcaccatgatcagc
aagcgcaagggcgtcaacgccttcgcctcgctgggctatcgcttcgacaacggcagcgag
tggttcgccgacgtgcagatgggttaccacgagctgtcgatgttccgcgacgtgagcagc
tggagttatcaggcgcccgacggcaacgaggacggctatttcttcaatcaggccaccgat
caggtcgagtactggcagcgtcagttttcgcccgaggaaatgggcggtctggacgccggc
acgatccgcaaccggcagaagaccctgagcctgaccaccggcttcaagggccgctggggc
gagctctgggattgggaagcggcgttgagccattcgcagtaccagtccacgatcagctgg
ccgcagatcgtcgcgtccaaggccaacgatctgttcctcggcccgcaactgggcagcgac
gacgacggcctgccgatcttcaacgccgatcccgagcgcctgtaccgtccgctcacccgc
gccgagtacgacgcgatcgccgcgcgcaccgtgtaccagcccaagtcgcgcaccgacacc
gcgtcgctgaccctgaccaacaccgagctgttcacgatgccggccggcgcggtcggtttc
gccggcaccctggaagtcggcaaccagagctacaacctgcgtcccgatccgctggcgacg
cagtactactactacagctggcgcgactccgacggcaaaggcagccgcgaccgctgggcc
gcggccggcgaactgcgcctgccgctgctggagaagctcaacctcagcgtcgccggccgt
tacgaccaatatcgctatggcggccacgacatcgacaagttcacctacagcgccggcctg
gaatggcgcccggtcgaatcgctgttgttgcgcggctcctacggcaccgcgttccgcgcg
ccggacctgcactacgtgttttccggcgagggcaatctggaatcgttcggcgccgactat
taccgctgccgcaccgaggagcccgattcggatctgggcgattgctcgtactccgacgaa
aacctggtggtgacccgccgcggtaaccgcgaactcgagcccgagaccagcaccgcgtgg
accgcgggcctggtgtggtcgccgatggcgaacctggatttctcgatcgattacttcaac
atcgaactgcgccagcaggtccaggacctgcgcatcgacggcatcctgcaggacgaggcc
aattgccgattgggccggcgtccggacggcagcacggtcgacgcagcctcgccgacctgc
gtcgatgcgctcgcgcgtgtgggccgcaacgacgatggcgacctgtacagcatctacatc
aacccgatcaacatcgcccgcgaacgcaccaacggcatcgacttcaacgcgcgttaccac
ctggaaacgcgcttcggcagctttcgcttcaacggcaactacagctgggtgcgcgaacac
gaaagccagcagtacagcggcgacccggtcgaggaccagttcgcggtcaacagcggtttc
gatattccgcgcagcaaggccagcgtcagcctgagctgggacaaggaccgctggactacg
accctgcacggcgaacgcctgggcaagctgccgaactacgattcctacaaccagtcctac
gaccccgacgacggcggcagcgcctgggtcggcgcgacctaccgctacaacgcctcggtg
cagtaccgcttcaccgaccacgcccagctgtcgctggcggtgaccaacctgttcgacaag
ctgccgccgaaagacgcgacttacaccagttacccgtattacgacgtgtcctggttcgac
acggtcggccgtcaggtgtacctgcaatacacccacaaattcggcggtagcgcgctttag
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