Lysobacter capsici: LC55x_0520
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Entry
LC55x_0520 CDS
T04162
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_0520
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_0520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ALN83820
LinkDB
All DBs
Position
581157..584051
Genome browser
AA seq
964 aa
AA seq
DB search
MKASRRHALAKAIQLSLLIGLPGFVAAQDAAPAREATTLDTVQVTGTRIKKAEIESQVPV
QTLTRDDIERTGLTSIGDVVQELTGSGSSFNGKRNASGNDGFPSDGGGVGAGATTVDLRH
LGSKRVLVLVDGIRWVNESSASGVGSSTDLNTIPLAIVERIEVLEDGASSLYGSDAIAGV
VNIITRRNFDGFQLTTNFGQYTEGDGTSRGLDFAYGGSSDRATWFLGASYTKQDEVSSSD
RERSRFPVPGTGLALGSSRVPGGRIAFTAPDGRKYDLVANAGQSNPTYTPGQAPCSAGVP
RTDGFHCFGSNDPFNFAPFNYVLSPSERKGVFGQFRFDINDKVRWYARALLNRRDSENRA
APEPIDLGPGAGNEFAANVVIPVNHPFNPFGVQLDSSNLSILRRRPVEGGPRRFEQQVDT
WFVGTGLEGTFDVGERAWFWDANLASSRNKAEQTNRGSYNAKNIATAMGDPAICAATPGC
TPLNIFGYNTITPAMLKWISPVLHDRSENKLQQATFNLSGDLFEMWAGPLSFATGYEYRK
YEGSYRPDPITVRGEYNGVPSLPTQGEYDVNEVYVELNVPLFKDSAFGKGLDLSLAGRYS
DYSTFGGEFTPKYGLRWQVADELLLRGTYAEGFRAPSIGELFGSQSRADVGMIDPCLIGS
NGAPPTGNAANCAAQGVNPGTRQVDPQISVLTGGNPNLEPERSTSFSLGFVWSPSILEDS
AIAKRVDIEGTFYSHRIEGAIQAIDPQTQLNLCVQTLSPEFCGGIQRNPITDQIDGFANF
LGNLSVIKTDGWDIDVFWTLPETRFGQFKLIWQNTIVGNYEAVGADGSLQPLQVGRLVSD
PVTRSIPEWTSNATLEWSYGHWNALWTARHISQLVEDCGDAADFAVCKNDPQTGQNRLGA
TTFHDFQVGYRFDVLKGLQLQAGMNNVFGKDPPVCLACNLNGFDGSTYDLPGGGYYYLRA
DLRF
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgtcgcgtcgccatgccttggcgaaagccatccagttgtcgttgttgatcggc
ctgccgggcttcgtcgccgcgcaggatgccgcacccgcccgcgaggccaccacgctggac
accgtccaggtcaccggcacccgcatcaagaaggccgagatcgaaagccaggtcccggtg
cagacgctcacccgcgacgacatcgaacgcaccggcctgacctcgatcggcgacgtggtg
caggaactcaccggttcgggctcgtcgttcaacggcaagcgcaacgcctcgggcaacgac
ggcttcccgtccgacggcggcggcgtcggcgccggcgcgaccacggtcgatctgcgtcac
ctgggttccaagcgcgtgctggtgctggtcgacggcatccgctgggtcaacgaatcctcc
gcctccggcgtgggttcctcgaccgacctcaacaccattccgctggccatcgtcgaacgc
atcgaagtgctcgaggacggcgcgtcctcgttgtacggctccgacgcgatcgccggcgtg
gtcaacatcatcacccggcgcaatttcgacggcttccagctcaccaccaatttcggccag
tacaccgagggcgacggcaccagccgcggactcgacttcgcctacggcggcagcagcgat
cgcgccacctggttcctcggcgccagctacaccaagcaggacgaagtcagttcgtccgat
cgcgagcgttcgcgcttcccggtgcccggcaccggcttggcgctgggcagttcgcgcgtg
cccggcggccgcatcgccttcaccgcgccggacggccgcaagtacgacctggtcgccaac
gcgggccagagcaacccgacctacacgcccggccaggcgccgtgctcggccggcgtgccg
cgcaccgacggtttccattgcttcggttccaacgacccgttcaacttcgcgccgttcaac
tacgtgctgtcgccgtccgagcgcaagggcgtgttcggccagttccgtttcgacatcaac
gacaaggtgcgctggtatgcgcgcgccttgctcaatcgccgcgattcggaaaaccgcgcc
gcgcccgagccgatcgacctggggcctggcgccggtaacgagttcgccgccaacgtggtg
atcccggtcaaccatccgttcaacccgttcggcgtgcagctcgattcgagcaatctgagc
atcctgcgtcgccgtccggtggaaggcggcccgcgccgcttcgaacaacaggtcgacacc
tggttcgtcggcaccggcctggagggcaccttcgacgtcggcgagcgcgcctggttctgg
gacgccaacctcgccagcagccgcaacaaggccgagcagaccaaccgcggcagctacaac
gccaagaacatcgccaccgcgatgggcgatccggcgatctgcgcggccacgccgggttgc
acgccgttgaacatcttcggctacaacaccatcaccccggcgatgctcaagtggatcagc
ccggtgctgcacgaccgcagcgagaacaagctgcagcaggcgacgttcaatctgtccggc
gatctgttcgagatgtgggccgggccgctgtcgttcgcgaccggttacgagtaccgcaag
tacgaaggctcgtaccgtcccgacccgatcaccgtgcgcggcgaatacaacggcgtgccg
tcgctgccgacccagggcgagtacgacgtcaacgaagtctatgtcgaactcaacgtgccg
ctgttcaaggactcggcgttcggcaagggcctggacctgagcctggccggccgctattcg
gattactccaccttcggaggcgagttcaccccgaagtacggcctgcgctggcaggtggcc
gacgagctgctgttgcgcggcacctacgccgaaggcttccgcgcgccgtcgatcggcgag
ctgttcggttcgcagagccgcgccgacgtcggcatgatcgatccgtgcctgatcggttcc
aacggcgcgccgccgaccggcaacgccgccaactgcgccgcgcagggcgtcaatccgggc
acgcgtcaggtcgatccgcagatctcggtgctgaccggcggcaatccgaacctggaaccg
gagcgttcgaccagcttctcgctgggcttcgtgtggtcgccgtcgattctcgaagacagc
gcgatcgccaagcgcgtcgacatcgagggcacgttctacagccaccgcatcgaaggcgcg
atccaggccatcgacccgcagacccagctcaacctgtgcgtgcagacgctgtcgccggaa
ttctgcggcggcatccagcgcaacccgatcaccgaccagatcgacggcttcgccaacttc
ctgggcaacctgagcgtcatcaagaccgacggctgggacatcgacgtgttctggaccttg
ccggaaacgcgcttcggccagttcaagctgatctggcagaacaccatcgtgggcaactac
gaagccgtcggcgccgacggttcgctgcagccattgcaggtgggccgactggtcagcgat
ccggtgacccgttcgattcccgaatggacctcgaacgcgaccctggaatggagctacggc
cactggaacgcgttgtggaccgcgcgccacatcagccagctggtcgaagactgcggcgac
gcggccgatttcgcggtgtgcaagaacgatccgcagaccggccagaaccgtctgggcgcg
acgaccttccacgatttccaggtcggttatcgcttcgacgtgctcaagggcctgcagctg
caggcgggcatgaacaacgtgttcggcaaggacccgccggtgtgtctggcctgcaacctc
aacggcttcgacgggtcgacctacgatctgccgggcggtggttactactacttgcgcgcg
gatctgcggttctga
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