Lysobacter capsici: LC55x_0531
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Entry
LC55x_0531 CDS
T04162
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_0531
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_0531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ALN83831
LinkDB
All DBs
Position
594391..597198
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AA seq
935 aa
AA seq
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MSRLKPATPQSQFNRHLLTMALASLGLCSSWTVWAADEPAPQDAAPAAAQAAPQAAHELD
AVQVTGNRRVQSIQKYAGTIQSFSGEDLTKLGINTDFRNLQAVVPGLQITKQEGKYEIFL
RGIGAADSDFSSDPSVATYYNGIYLPRPRSIGPMFFDVDRIEVNKGPQGTVRGRNATGGS
INVISKRPELGVTSGGLKIGAGNHDFTTAEGVLNLPIGETFALRAALFDEERSSYISNGY
PKSLFDAEGPGALDNQAARLSMLWEPNDKFSAFVMLDKVTERGTGDPGLFAERGLSAGYD
IKDLHDPFKQYFRTQGQTTNDIEGIAGTFTYAFNDKISVEFNTSYRKYDFYNRNASREWQ
LGPVYPGSEREAYFNPERLDWYDTFYQADKSSSTINELRFFGDTGRVIWSAGLFNYEEKY
DYTSWDVGNGYFGDCDWWRPGTICGYQDGLGGENRGDNSKVESNAAYADFSFAATDSLRL
IGGVRYTRDKKIARESNVKYQFIIPEELFAQFTGQPINTATNPYTTGLILGSPGFRLAPP
GNRGGGQPSICTGWSPADLRCGPGGNTLDYFLGGIQNFGAQDNWQQFLRQNRDQIQVIAR
SDFPNGRSEDVYKDSYVDWRVGFEYDINPQVMVYGTVSTGTRSGGINRPLLLNDGSALAP
TFEPEELTSYEAGIKGDYVWGETPVRLNASVFYYDYKNKVLQNLIDVPAPTPTNPNATSR
QVFNDNAANASVLGLELEGRVGLPYGFNLGYNFTYLDATFDESNVLDTRSGGLGLIVPLD
GNRLPNTSKYNANVSLSQTIDIGRGALSSFDWTINLTYRSDYYLTAFNSRGFGLDANGRV
IEIPLRDMPFNNGSNPAAGGGPANGLAMRDDVDGFMTVNVSAGLNFGSDNQFRIDGFVSN
LTDEVYSGKGFVNNATNIRYLNTPRMYGVRFSSQF
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagactcaagccggccacgccgcaatcgcaattcaatcgccatctgttgacgatg
gccctggcctcgctggggctgtgcagttcctggacggtgtgggcggccgatgaaccggcg
ccgcaggacgccgcgcccgccgccgcgcaggccgcgccgcaagccgcgcacgaactcgac
gcggtccaggtcaccggcaaccgccgcgtgcagtcgatccagaagtacgccggcacgatc
cagtcgttcagcggcgaggacctgaccaagctcggcatcaacaccgacttccgcaacctg
caggcggtggtgcccggtttgcagatcaccaagcaggaaggcaagtacgaaatcttcctg
cgcggcatcggcgcggccgattcggacttctcctccgatccgtcggtggcgacctactac
aacggcatctacctgccgcgtccacgctcgatcgggccgatgttcttcgacgtcgaccgc
atcgaggtcaacaagggcccgcagggcacggtgcgcggccgcaacgcgaccggtggttcg
atcaacgtgatctccaagcgcccggagctcggcgtgaccagcggcgggctcaagatcggc
gccggcaatcacgacttcaccaccgccgagggcgtgctcaatctgccgatcggcgagacc
ttcgcgctgcgcgcggccttgttcgacgaggaacgctcctcgtacatcagcaacggttat
cccaagtcgctgttcgacgccgaaggcccgggcgcgctcgacaatcaggccgcgcgcctg
tcgatgctgtgggaacccaacgacaagttctccgcgttcgtgatgctcgacaaggtcacc
gagcgcggcaccggcgacccgggcctgttcgccgagcgcggcctgtcggcgggttacgac
atcaaggacctacacgacccgttcaagcagtacttccgcacccagggccagaccaccaac
gacatcgaaggcatcgccggcaccttcacctatgccttcaacgacaagatctcggtcgag
ttcaacacctcgtaccgcaagtacgatttctacaaccgcaacgcctcgcgcgagtggcag
ctcggcccggtgtatccgggttcggagcgcgaagcctatttcaatcccgagcgcctggac
tggtacgacacgttctatcaggccgacaagtccagttcgaccatcaacgaactgcgtttc
ttcggcgacaccggccgggtgatctggtcggcgggcctgttcaactacgaagaaaagtac
gactacacctcgtgggacgtcggcaacggctacttcggcgattgcgactggtggcgtccg
ggcacgatctgcggttaccaggacggcctgggcggcgagaaccgcggcgacaactccaag
gtcgaatcgaatgcggcgtatgccgatttcagcttcgccgcgaccgattcgctgcgcctg
atcggcggcgtgcgctacacccgcgacaagaagatcgcgcgcgaatccaacgtcaaatac
cagttcatcattcccgaggaactgttcgcgcagttcaccggccagccgatcaacaccgcg
accaatccctacaccaccggcctgatcctgggttcgccgggcttccgcctggcgcctccg
ggcaatcgcggcggcggccagccgagcatctgcaccggctggagcccggccgacctgcgt
tgcgggcccggcggcaacacgctggattatttcctcggcggcatccagaacttcggcgcg
caggacaactggcagcagttcctgcggcaaaaccgcgaccagatccaggtgatcgcgcgt
tctgacttccccaacggccgcagcgaagacgtctacaaggacagctacgtcgactggcgc
gtgggcttcgaatacgacatcaatccgcaggtgatggtgtacggcaccgtgtccaccggc
acccgctcgggcggcatcaaccggccgttgctgctcaacgacggcagcgcgctggcgccg
accttcgaacccgaagagctgacgtcgtacgaagccggcatcaagggcgactacgtctgg
ggcgagaccccggtgcgcttgaacgcgtcggtgttctattacgactacaagaacaaggtg
ctgcagaacctgatcgacgtgccggcaccgacgccgaccaatccgaacgcgaccagccgc
caggtgttcaacgacaacgccgccaacgcgagcgtgctgggcctggaactggaaggccgg
gtcggcctgccgtacggcttcaacctgggctacaacttcacctatctggatgcgaccttc
gacgagtcgaacgtgctcgacacgcgttcgggcggcctgggcctgatcgtgccgctggac
ggcaaccgcctgccgaacacctcgaagtacaacgccaacgtcagcctgtcgcagaccatc
gacatcggccgcggcgcgctgtcctcgttcgactggaccatcaacctgacctaccgctcc
gattactacctgaccgcgttcaacagccgcggtttcggcctggacgcgaacggccgggtg
atcgagatcccgctgcgcgacatgccgttcaacaacggctccaacccagccgcgggcggc
ggcccggccaacggtctggcgatgcgcgacgacgtcgacggcttcatgaccgtcaacgtc
tcggccggtctgaacttcggcagcgacaatcagttccgtatcgacggcttcgtgtccaac
ctcaccgatgaggtgtactcgggcaagggcttcgtcaacaacgcgacgaatattcgttat
ctgaatacgccgcggatgtatggggtacggttctcgtcgcagttctga
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