Lysobacter capsici: LC55x_0538
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Entry
LC55x_0538 CDS
T04162
Name
(GenBank) bacterial extracellular solute-binding, 5 Middle family protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
lcp
Lysobacter capsici
Pathway
lcp01501
beta-Lactam resistance
lcp02010
ABC transporters
lcp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LC55x_0538
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC55x_0538
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LC55x_0538
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_0538
Transporters [BR:
lcp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
LC55x_0538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ALN83838
LinkDB
All DBs
Position
complement(603721..605325)
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AA seq
534 aa
AA seq
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MPLALALLWLIAPGARAQAAATMLERGNGPEPSTLDAHRCQEVACGNVLRDLYEGLVTED
ARGRLIPGMAQRWSVSADGRNWTFTLREGLQWSNGEPIDAQQIVASFRRAFAPATAAPFG
ELFDALDNAQAVQAGKLPPQRLGVSATDARTVVFRLNRSAGLPALLTLPIAFPVYLPAVE
QYGAQHTRPGRLVSNGAYRLAAWTPQANLVVEKNPRFHDAAAVAIERVRFQVTEDAAAEL
QRFAAGDLHITEVVPPQPLPALRKRFGAQLRLSPYLGAFWLGINLTRPPLRSAACATPPC
EDRELALRRALTLAIDRDKLTRYVTGLGETPAYGIVPPGIAGYTPAAMPWQSLSQTQREE
HARALYRHAGYSDDKPLVIELRYNTSTPHRRLTLAVAAMWRQTLGVQVRLRNEEWKVFVQ
NRKQRTITQVFRGGWIGDLADARNFLAAFGSDGPLNWMGYDDAGYRERLAKADAAHSEAA
RNAWLRAAEQRLLNDNAAIPLYFYSSKHLVASNVRGFEANALDRHASRWLSLSP
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
ttgccactggcgctggcgttgctgtggctgatagcgccgggcgcgcgggcgcaggccgcg
gcgacgatgctcgaacgcggcaacggcccggagccgagcacgctggacgcccaccgctgc
caggaagtggcctgcggcaacgtgctgcgcgacctgtacgagggcctggtcaccgaggac
gcgcgcggccggctgatcccgggcatggcgcagcgctggtcggtctcggccgacggccgc
aattggaccttcaccctgcgcgaaggcctgcaatggagcaacggcgagccgatcgacgcg
cagcagatcgtcgccagtttccgccgcgcgttcgctccggccacggccgcgccgttcggc
gaactgttcgacgcgctcgacaacgcgcaggcggtgcaggccggcaaactgccgccgcag
cggctcggcgtgagcgcgaccgatgcgcgcaccgtggtgttccgcctgaaccgcagcgcc
ggcttgccggccttgctgaccttgccgatcgccttccccgtgtatctgcccgcggtcgaa
cagtacggcgcgcaacatacgcggccggggcgattggtatcgaacggcgcgtaccggttg
gccgcgtggacgccgcaggccaacctggtggtggagaagaacccgcgtttccacgacgcc
gccgcggtcgcgatcgaacgcgtgcgcttccaggtcaccgaagacgccgccgccgaactg
caacgcttcgccgccggcgacctgcacatcaccgaggtggtgccgccgcagccgttgccg
gccttgcgcaaacgcttcggcgcgcaactgcgcttgtcgccctacctgggcgcgttctgg
ctcggcatcaacctgacccggccgccgctgcgcagcgccgcctgcgcgacgccgccctgc
gaggatcgcgaactcgcgctgcggcgcgcgctgaccctggcgatcgatcgcgacaagctc
acccgctacgtcaccggcctgggcgaaaccccggcctacggcatcgttccaccgggtatc
gccgggtatacgcccgcggcgatgccgtggcagtcgttgagtcaaactcagcgcgaggaa
catgcgcgcgcgctgtaccgtcacgcgggctattcggacgacaagccgctggtgatcgaa
ctgcgttacaacacctcgaccccgcatcgtcgcctcaccctcgcggtcgcggcgatgtgg
cggcagaccctcggcgtgcaggtgcggctgcgcaacgaggagtggaaagtgttcgtgcag
aaccgcaagcagcgcaccatcacccaggtgttccgcggcggctggatcggcgatctggcc
gatgcgcgcaacttcctcgccgcgttcggcagcgacgggccgctgaactggatgggctac
gacgacgccggttatcgcgaacgcctggccaaggccgacgcggcgcactcggaagccgcg
cgcaacgcctggctgcgcgcggccgagcagcggctgttgaacgacaatgcggcgattccc
ctgtatttctacagctccaagcatctggtcgcgagcaacgtgcgcggtttcgaagccaac
gcgctcgatcgtcacgccagccgctggctgagtctgtcgccatga
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