Lysobacter capsici: LC55x_0630
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Entry
LC55x_0630 CDS
T04162
Name
(GenBank) porphyromonas-type peptidyl-arginine deiminase family protein
KO
K10536
agmatine deiminase [EC:
3.5.3.12
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00330
Arginine and proline metabolism
lcp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LC55x_0630
Enzymes [BR:
lcp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.3 In linear amidines
3.5.3.12 agmatine deiminase
LC55x_0630
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Gene cluster
GFIT
Motif
Pfam:
PAD_porph
Motif
Other DBs
NCBI-ProteinID:
ALN83930
UniProt:
A0A0S2FKA0
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Position
complement(702204..703397)
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AA seq
397 aa
AA seq
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MSGSLAKVRVQAYLTRQVSPMHTSTLPRAGWRPLVAGVLCALALSAAAPGAAHAQAGYMP
DETARHEGTWLQWPHAYTYGRAYRDRLDPTWVAMTRALVASENVHLIVYDANEQTRVRAL
LSAAGVALTKVSFLIRPTDDVWVRDNGPLFVYDRNDQLTITDWGFNGWGFDAPYRKDDVV
PAAVAGRLGLPRVDVNDVVLEGGAIEVDGRGVLMATRSSTREPNRNAELSEAELEAVLSE
QLGVSKFIWLDGAPGGKDDITDMHIDGFARFGTPDTVVTMSRADLRQWGLSSTDIDRLYR
ASDIDGAAYRIVQLPLTARDVVTAYGYELGYKGSYVNYYVGNTVVLMPEYKDPNDAVAKS
ILQGLYPGRSVIGIDVRNLYRNGGMVHCVTQQQPAAL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggttcgctggctaaggtgcgcgtccaggcctacctcacccgacaggtttccccc
atgcacacctccacccttccccgcgccggctggcgtccgctggtcgccggcgtcctgtgc
gccctcgccctgagcgccgccgcacccggcgcggcccatgcgcaggccggctacatgccc
gacgaaaccgcgcgccacgaaggcacctggctgcaatggccgcacgcctacacctatggc
cgcgcctatcgcgaccggctcgatccgacctgggtggcgatgacccgcgccctggtcgcc
agcgagaacgtgcacctcatcgtctacgacgccaatgagcagacccgcgtgcgcgccctg
ctcagcgccgccggtgtcgcgctgaccaaggtgagttttctgatccgcccgaccgacgat
gtgtgggtgcgcgacaacggcccgttgttcgtctacgaccgcaacgaccagctgacgatc
accgactggggtttcaacggctggggcttcgatgcgccctaccgcaaggacgacgtcgtg
cccgccgccgtcgcaggccgtctcggcctgccgcgcgtggacgtcaacgatgtggtgctc
gaaggcggcgcgatcgaagtcgacggtcgcggcgtgctgatggccacgcgcagctccacg
cgcgagccgaaccgcaacgccgagctcagcgaagccgaactcgaagcggtgctgtccgag
caactgggcgtgtccaagttcatctggctcgacggcgcgccaggcggcaaggacgacatc
accgacatgcatatcgacggcttcgcccgcttcggcacgccggacaccgtggtcaccatg
agccgcgccgatctgcgccaatggggcctgtcgtcgaccgacatcgatcgcctgtaccgc
gcgagcgatatcgacggcgcggcctaccgcatcgtgcagctgccgctgaccgcgcgcgac
gtggtgaccgcgtacggctacgaactgggctacaagggctcgtacgtgaactactacgtc
ggcaacaccgtcgtgctgatgcccgagtacaaggatcccaacgacgcggtcgccaaatcg
atcctgcaaggcctctacccgggccgcagcgtgatcggcatcgacgtgcgcaatctgtat
cgcaacggcggcatggtgcattgcgtgacccagcagcagcccgcggcgctgtga
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