Lysobacter capsici: LC55x_0650
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Entry
LC55x_0650 CDS
T04162
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_0650
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_0650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ALN83950
LinkDB
All DBs
Position
724658..726877
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AA seq
739 aa
AA seq
DB search
MSAAIGLAMLMHLQQAQAQDAAEPEQAQAQSAEASARKPTQLESVTVTARKREETLQDVP
IAVSAFTASALFEQNVQNLGDLQGKVPSLQVYAARGSNTTLTAYIRGIGQADPTWGFDPA
VGVYLDDVYLARPQGALLDVFDVSRIEVLRGPQGSLYGKNTIGGAIKYVSNPLPKTTQGS
VEASIGTHGEQGIKASLGGASDDGVWRARVAAASMHNDGYGDNLTYDSRNGNKNTNAARA
TLGFFPSDDFSIELALDGMHDNSNPRGAKMLKANRFYPSYRPLDSDYDTRSGMPQVNHSE
LEGAALTFKWIANADWSFKSITAYRSSETRSNIDFDTLPQKIGDAGGSYSDHQFSQELQA
NFDSGGSVHGVLGLFYFNGAAGGINRSTFLGSPPYTLLGLSQFAVSSGKVDTRSVAAYAD
FSWDIDPDWSLDVGLRFTDETKRALILNYAYADPAFQRPIAELANFTGSNSSRNVSPKVS
LSWRANDRINLYASYNTGFHSGGYNIRANCAVIPSSCRPIDDEKVQSYELGSKMSFFDDR
LMINTSVFHNDYSNIQLSVFTSYTLPGGSTGFFGDYTNAGKGYIQGLEQEFAWKPSEHWT
LSGNLAYLRTKYSEYLSGGVDIADSQRFTNAPRWSGGLSLEGQYPLARGGSLGGRINYSY
QTKIYPETTLSPLIAQRAYGLWNAGVIWRINEPWTLSLQGSNLADKSYRTTGYNVAALDI
VTGFYGAPRTVTLSARYEF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgcggcgatcggtctggcgatgctgatgcatctgcagcaggcgcaggcgcaggac
gcggccgagcctgagcaagcgcaggcgcaaagcgccgaagcgtcggcaaggaaaccgacc
cagctggaatcggtcaccgtgaccgcgcgcaagcgcgaggagaccttgcaggacgtgccg
atcgcggtcagcgcgttcaccgcctcggccttgttcgagcagaacgtgcagaacctcggc
gacctgcagggcaaggtgccgtcgttgcaggtgtatgccgcgcgcggctccaacaccacc
ttgaccgcctacatccgcggcatcggtcaggccgatccgacctggggcttcgatcccgcg
gtcggcgtgtatctcgacgatgtctacctggcccggccgcagggcgcgctgctcgacgtg
ttcgatgtcagccggatcgaagtgctgcgcggaccgcagggcagcctgtacggcaagaac
accatcggcggcgcgatcaagtacgtgtccaaccccttgccgaaaaccacccagggttcg
gtcgaagccagcatcggcacgcacggcgagcagggcatcaaggcgagcctgggcggcgcc
agcgacgacggcgtgtggcgcgcgcgggtcgcggcggcgagcatgcacaacgacggctac
ggcgacaacctgacctacgacagccgcaacggcaacaagaacaccaatgccgcgcgcgcg
accctgggttttttcccgtccgacgatttcagcatcgagctggcgctcgacggcatgcac
gacaattccaatccgcgcggcgccaagatgctcaaggccaaccgcttctatccgtcgtac
cggccgctggacagcgattacgacacccgcagcggcatgccgcaggtcaatcacagcgaa
ctcgaaggcgccgcgctgaccttcaaatggatcgccaacgccgactggagtttcaagtcg
atcaccgcctaccgcagttcggaaacccgctcgaacatcgatttcgataccttgccgcag
aagatcggcgacgccggcggcagctacagcgatcaccagttcagccaggagctgcaggcg
aatttcgattccggcggcagcgtgcacggcgtgctggggctgttctatttcaacggcgcg
gccggcggcatcaaccgcagcacgtttctcgggtcgccgccgtacaccttgctgggcctg
tcgcagttcgcggtcagcagcggcaaggtcgacacccgcagcgtggcggcctacgccgat
ttcagttgggacatcgacccggactggagcctggacgtcggcctgcgcttcaccgacgaa
accaagcgcgcgctgatcctcaactacgcctacgccgatccggcgttccagcggccgatc
gcggagctggccaacttcaccggttccaattcctcgcgcaacgtgtcgccgaaggtgtcg
ctgtcgtggcgcgcgaacgaccggatcaacctgtatgccagctacaacaccggctttcat
tccggcggctacaacatccgcgccaactgcgcggtgatcccgagttcgtgccggccgatc
gacgacgagaaggtccagtcctatgaactgggcagcaagatgagcttcttcgacgaccgc
ctgatgatcaacacctcggtgttccacaacgactattccaacatccagctgtcggtgttc
acctcctacaccttgcccggcggcagcaccggcttcttcggcgactacaccaatgccggc
aagggctatatccaggggctggagcaggagttcgcctggaaaccgtcggagcattggacg
ctcagcggcaaccttgcgtatctgcgcaccaagtacagcgagtacctgagcggcggcgtc
gatatcgccgacagccagcgcttcaccaacgcgccgcgctggtcgggcggactcagcctg
gaagggcagtatccgctggcccgcggcggcagcctgggcgggcggatcaattacagctac
cagaccaagatctatccggagaccacgttgtcgccgctgatcgcgcagcgcgcctacggg
ctgtggaacgccggggtgatctggcggatcaacgagccgtggacgctgagcctgcagggc
agcaacctggccgacaagtcgtaccgcaccaccggttacaacgtcgccgcgctggacatc
gtgaccggtttctatggcgcgccgcgcacggtgaccttgtcggcgcgttatgaattctga
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