Lysobacter capsici: LC55x_0843
Help
Entry
LC55x_0843 CDS
T04162
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_0843
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_0843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ALN84140
LinkDB
All DBs
Position
936822..939674
Genome browser
AA seq
950 aa
AA seq
DB search
MAKISYAFIVSVALTFASQAGAFPAAADDFPADGYNIPAGALDDALNEFARRHHLQISYS
PALVARRRSRGLRGAGSVREGLARLLEGTGLTAVAVKPNVYLLQASARPARLEPAPVPAA
KPMATAKPPVPTELDTVHVTGTRIGRADFESSLPLTLITNEQIRASGHQTLFDLLRLMPG
MTGHHPRNVATEGGATQVPSAAAASASLYSLGPRATLFLVDGRRMANYGLVSTDMGALTD
LNGIPLSMVDHIEIAHGGASAIYGADAMAGVVNIILKKDYRGAEVGGSFGVSQRGDAEQQ
RAYASFGERTPGDGSIFVSVDHYTRNPLIGSQRRWSTLDQRFDGQRDLRVPSGFTLGNFV
VAPAPGCEGGEAVQESAACSLDIPRYVSLQPGITSNAFYTHFRQPLGDNAEFYADLRATR
VSLEMQNAPFYASVQLPEGHPDSFKPFPFLNLNYWFSELGPVRNRSVTTTRDYTAGIKGY
RGKWEWDVSLSRRRNKVVNRIDGLIDEPALFGTESDPAVSTFRFSKTEENPPEVLAAISP
RTTLGGEVVLDTVSGSIEGPLFTLPAGDLKVAAGFEARHERVRNRPDDAFIKGKIALAQE
ADSRDASRNTSAIYAEFNAPLHEKLWVNAAWRLDRDAGYGKQISPMFGVRWQPLRSLALR
GSFGEGYRAPTLAELRRPLVVDNQAFVRSDATTQPCLIDYGDYCQVVQRAVINPDLRPET
STSRSLGLIWTPNEDFTVTVNRYRIRRNNEILAIDAASRPDLFPKALIRDADGYLDTVET
YLDNVGSTEVRGWEIDAEYRHQTQRWGNLSFRINGHYMDHLLRRLHPKEREYDFSGYGTP
NNTVLGSVRWSYRDWIATLNLRYMGHATVGIQPGQDCVLLGEPGRCRTPSATLVGFDVAY
GGFDKWLIGLNVSNLNDRRPVNYDYSFGGYSIVDDDPVGRYYLVSAVYRF
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatttcctatgcgttcatcgtttccgtcgcgctgacgtttgcgtcgcaagcc
ggggccttcccggccgctgcggacgattttccagccgatggctacaacattccggccggc
gcgctcgacgacgcgctgaacgagttcgcgcgtcggcatcacctgcagatctcctattcc
ccggccctggtcgcgcgtcggcgcagccgcggcctgcgcggcgccggctcggttcgcgaa
ggcctggcccgcctgctggagggcaccggcctcaccgcggtagccgtaaagcccaatgtt
tacttgctacaggcctcggcgcgcccggcccggcttgagcccgcgccggtgccggcagcc
aagccgatggccaccgccaagccgcctgtgccgaccgaattggacacggttcatgtgacc
gggacgcgcatcggacgtgccgatttcgaaagttcgctgccgctgaccctgatcaccaac
gaacagatccgcgccagcggtcaccagaccctgttcgacctgctgcggctgatgccgggc
atgaccggccaccatccgcgcaacgtcgccactgagggcggcgcgacccaggtgccctcg
gccgcggcggcctcggccagcctgtattcgctggggccgcgcgcgaccttgttcctggtc
gacggccggcgcatggccaactacggcctggtctccaccgacatgggcgcgctgaccgac
ctcaacggcattccgctgagcatggtcgaccatatcgagatcgcccacggcggcgcctcg
gcgatctacggcgccgacgccatggccggcgtggtcaacatcattctcaagaaggattac
cgcggcgccgaggtcggcggcagcttcggcgtgtcgcaacgcggcgacgccgagcagcaa
cgcgcctacgccagcttcggcgaacgcacgcccggcgacggcagcatcttcgtcagcgtc
gatcactacacccgcaatccgctgatcggcagccagcgccggtggagcacgctggaccag
cgcttcgacggccagcgcgacctgcgcgtgccgtcgggctttaccctcggcaacttcgtc
gtggcgccggcgcccggttgcgagggcggcgaagcggtgcaggaaagcgccgcctgcagc
ctcgacattccgcgctatgtgagcctgcagccgggcatcaccagcaacgcgttctacacc
catttccgccagccgctcggcgataacgccgagttctacgccgacctgcgcgcgacccgg
gtcagcctggagatgcagaacgcgccgttttacgcctcggtgcaactgcccgaggggcat
ccggattcgttcaagccgttcccgttcctgaacctcaactactggttctccgaactcggt
cccgtgcgcaaccgcagcgtcaccaccacccgcgactacaccgccggcatcaagggctat
cgcggcaagtgggagtgggacgtcagcctgtcgcgccgccgcaacaaggtggtcaaccgc
atcgacggattgatcgacgagccggcgctgttcggcaccgaatccgatccggcggtcagc
accttccgtttcagcaagaccgaggaaaacccgcccgaggtgctcgctgcgatctcgccg
cgcaccaccctgggcggcgaagtggtgctcgacaccgtgtcgggcagcatcgaggggccg
ctgttcacgctgcccgcgggcgatctcaaggtcgccgccggcttcgaggcgcggcacgaa
cgcgtgcgcaaccggcccgacgacgccttcatcaagggcaagatcgccttggcgcaggaa
gccgactcgcgcgacgccagccgcaacacctcggcgatctacgccgagttcaacgcgccg
ctgcacgagaagctgtgggtcaacgcggcctggcgcctggaccgcgatgccggctacggc
aagcagatctcgccgatgttcggcgtgcgctggcagccgttgcgttcgctggccttgcgc
ggttccttcggcgagggctaccgcgcgccgaccctggccgaactgcgccgtccgctggtg
gtcgacaaccaggcgttcgtgcgctccgacgccaccacccagccgtgcctgatcgattac
ggcgattactgccaggtcgtccagcgcgcggtgatcaaccccgacctgcgcccggaaacc
tcgaccagccgcagcctgggcctgatctggacgccgaacgaagacttcaccgtcaccgtc
aatcgctaccgcatccgccgcaacaacgagatcctggcgatcgacgccgcgtcgcgcccc
gacctgtttccgaaggccttgatccgcgacgccgacggctatctggacacggtcgagact
tacctcgacaacgtcggcagcaccgaagtgcgcggctgggaaatcgacgccgaataccgt
caccagacccagcgctggggcaacctgtcgttccgcatcaacggccactacatggaccac
ctgctgcgccggttgcatccgaaggaacgcgagtacgacttttccggctacggcacgccc
aacaacaccgtgctgggcagcgtgcgctggagctatcgcgactggatcgccacgctcaac
ctgcgctacatgggccacgccacggtcggcatccagccgggccaggactgcgtgctgctg
ggcgagcccggacgttgccgcacgccgagcgcgaccctggtggggttcgacgtcgcctac
ggcggtttcgacaagtggctgatcggtttgaacgtcagcaacctcaacgatcgccggccg
gtcaattacgactacagcttcggcggctacagcatcgtcgacgacgacccggtcggccgc
tattacctggtcagcgcggtgtaccgcttctga
DBGET
integrated database retrieval system
