Lysobacter capsici: LC55x_0869
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Entry
LC55x_0869 CDS
T04162
Name
(GenBank) bacterial regulatory, Fis family protein
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcp03000
]
LC55x_0869
03036 Chromosome and associated proteins [BR:
lcp03036
]
LC55x_0869
03400 DNA repair and recombination proteins [BR:
lcp03400
]
LC55x_0869
Transcription factors [BR:
lcp03000
]
Prokaryotic type
Helix-turn-helix
Other families
LC55x_0869
Chromosome and associated proteins [BR:
lcp03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
LC55x_0869
DNA repair and recombination proteins [BR:
lcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LC55x_0869
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
HTH_30
Fis_N
Xre-like-HTH
HTH_29
HTH_28
Phage_NinH
HTH_23
UBA_Ucp12
BrkDBD
HTH_17
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
ALN84166
LinkDB
All DBs
Position
complement(963704..963976)
Genome browser
AA seq
90 aa
AA seq
DB search
MNALNDRNEAARTGPRVPLRDHVATSIRRYLGDLNGSGTENLYEIALRELEIPLFAEVLQ
HCDGNQSRAAAMLGIHRATLRKKLREYGLE
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgcactcaacgaccgcaacgaagccgcccgcaccggaccccgggtgccgctgcgc
gatcatgtcgcgacttcgatccgtcgttacctgggcgacctcaacggcagcggcaccgaa
aacctgtacgaaatcgcgctgcgcgaactggaaatcccgctgttcgccgaagtgctgcag
cattgcgacggcaatcagagccgcgccgcggcgatgctgggcatccatcgcgcgaccctg
cgcaagaagctgcgtgagtacgggctggaataa
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integrated database retrieval system
