Lysobacter capsici: LC55x_0895
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Entry
LC55x_0895 CDS
T04162
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lcp
Lysobacter capsici
Pathway
lcp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LC55x_0895 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcp03019
]
LC55x_0895 (groL)
03110 Chaperones and folding catalysts [BR:
lcp03110
]
LC55x_0895 (groL)
03029 Mitochondrial biogenesis [BR:
lcp03029
]
LC55x_0895 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcp04147
]
LC55x_0895 (groL)
Enzymes [BR:
lcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LC55x_0895 (groL)
Messenger RNA biogenesis [BR:
lcp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LC55x_0895 (groL)
Chaperones and folding catalysts [BR:
lcp03110
]
Heat shock proteins
HSP60 / Chaperonin
LC55x_0895 (groL)
Mitochondrial biogenesis [BR:
lcp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LC55x_0895 (groL)
Exosome [BR:
lcp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LC55x_0895 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LC55x_0895 (groL)
Exosomal proteins of breast cancer cells
LC55x_0895 (groL)
Exosomal proteins of colorectal cancer cells
LC55x_0895 (groL)
Exosomal proteins of bladder cancer cells
LC55x_0895 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Peptidase_M2
Motif
Other DBs
NCBI-ProteinID:
ALN84192
LinkDB
All DBs
Position
990911..992551
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEIRFGEDARAKMVRGVNILANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASKTSDNAGDGTTTATVLAQALIREGMKAVAAGMNPMDLKRGI
DKAVVEAVGELKKLSKPSSTSKEIAQVGAISANSDADIGNLIAQAMDKVGKEGVITVEDG
SGLENELDVVEGMQFDRGYLSPYFINNQQSMSAELDDPYVLLYDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVCAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLQLEKATIKDLGRAKKVQVSKENTTIIDGAGDGETIQSRIKQIKAQIEETSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RAKAAISGLKGANEDQNHGIQIALRAMEAPLREIVTNAGEEPSVILNKVQEGTGAFGYNA
ANGEYGDMLEFGILDPTKVTRTALQNAASIAGLMITTEAMVAELPKKDEPAMPGGGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagaaattcgtttcggtgaggacgcacgcgccaagatggtgcgcggcgtc
aacattctcgccaatgccgtaaaggccaccctcggtccgaagggccgcaacgtcgtgctc
gagaagagcttcggcgcgccgacgatcaccaaggacggcgtgtccgtcgccaaggaaatc
gagctggccgacaagttcgagaacatgggcgcgcagatggtcaaggaagtcgcttccaag
acctccgacaacgccggcgacggcaccaccaccgcgaccgtgctggcgcaggcgctgatc
cgcgagggcatgaaggcggtcgccgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggccgtggttgaagccgtcggcgaactcaagaagctgtccaagccgtcctcgacc
agcaaggaaatcgcccaggtcggcgcgatctcggccaactccgacgccgacatcggcaac
ctcatcgcccaggcgatggacaaggtcggcaaggaaggcgtgatcaccgtcgaagacggt
tcgggcctggagaacgagctcgacgtggtcgagggcatgcagttcgatcgcggctacctg
tcgccgtacttcatcaacaaccagcagtcgatgtcggccgagctggacgacccgtacgtg
ctgctgtacgacaagaagatctccaacgtgcgcgacctgctgcccgtgctggaaggcgtg
gccaaggccggcaagccgctgctgatcgtcgccgaggaagtcgaaggcgaagcgctggcg
accctggtggtcaacaccatccgcggcatcgtcaaggtctgcgccgtcaaggcgccgggc
ttcggcgaccgtcgcaaggcgatgctcgaagacatggccgtgctgaccggcggcaccgtg
atctccgaggaagtcggcctgcagctcgagaaggccacgatcaaggatctgggccgcgcg
aagaaggtgcaggtctccaaggagaacaccaccatcatcgacggcgccggcgacggcgag
acgatccagtcgcgcatcaagcagatcaaggcgcagatcgaagagacctcgtcggactac
gatcgcgagaagctgcaagagcgcgtggccaagctggccggcggcgtcgcggtgatcaag
gtcggcgcgtcgaccgagatcgagatgaaggaaaagaaggctcgcgttgaagacgcgctg
cacgccacccgcgcggccgtggaagaaggcatcgtcccgggcggcggcgtcgcgctgctg
cgcgccaaggccgcgatcagcggtctgaagggcgccaacgaagatcagaaccacggcatc
cagatcgccctgcgcgcgatggaagcgccgctgcgcgagatcgtcaccaacgccggcgaa
gagccgtcggtcatcctgaacaaggtccaggaaggcaccggcgcgttcggctacaacgcc
gccaacggcgaatacggcgacatgctcgagttcggcatcctggacccgaccaaggtcacc
cgcaccgcgctgcagaacgccgcgtcgatcgccggtctgatgatcacgaccgaagcgatg
gtcgccgagctgccgaagaaggacgagccggcgatgccgggcggcggtggcatgggcggc
atgggcggcatggatttctga
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