Lysobacter capsici: LC55x_0953
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Entry
LC55x_0953 CDS
T04162
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_0953
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_0953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ALN84250
LinkDB
All DBs
Position
1061203..1064043
Genome browser
AA seq
946 aa
AA seq
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MSAFVPAIAGAQEADASNQATTTLDRIEVTGSRIRQASLETAQPVVTMSRAEIQKQGFTS
VADIVQNITASGSPAISRADALSSGEEVGGQYVDLRNLGPQRTLVLIDGKRMGISSAGYS
DLAAIPSSIVERIEVLTDGASALYGSDAIAGVINIITRKRFDGLEASAYLGQYGQGDGNK
EIYNFVIGQTGERGSITLGAEYSKEDPVLAKDRSITRYPNGPRHPFPTADDTNGWSPINQ
WGTLFDSAGNPLTANRGTTDTKNPNNFHPTDAILDQANANEQMYLSTGLERRSVFANAEF
DITDNVRAKADVLYTDREATQQIAGYPFRSNGFSSRYAGDLRLDGNSAFNPLGYDADFYR
RGWEVPRQTKSELTTYRFSGGLEGTFEFAGKPWDWDIGYVYNQNKGVKTQTGNLFLPNAE
KALGPSFIDASGVARCGTAAAPIAGCLAWNPLLGPDVNAPGSMNNKELQKYLFLPTHDTS
TTETQVYSLNLSGVLATLPAGDLGIAAGYEHRKESAHYSPDALLQSGLSTSLAGSETQGG
YSLDEFYVELAVPLLSDVAFAKELSFNIAGRYSDYNTFGDTTNGKFSLKWKPIDDLLIRG
TYATGFRAPTVADLYGGVGESFDNYTDPCDTVFGAVRGNARCAAAVPANFRQAASGGSAA
TGPNAQSNTAFLSGSNPNLIPETSKSTTIGFVYSPSWVSGLDVSLDWWKIKIDDVIAAET
VTSLLNNCYVLGIDEACSRFVRSTNPRSLGQVVGVTRTLINGGYQETAGYDLGISYRLPE
TRFGNFAFNWKTTYVDYLEYKRDSESTTPVEQRTSWVANDSANFRVRSSFNADWSMGDFG
ASWNVRYYSGLKEECAYDLDGGPECDIPDYRSAYKGQVGVREVGSNTFHDMQVRYNTPWN
ATVAVGANNVFDHLGQTMYSQPNSSFSYNGSFDIGRFVYMKYTQRF
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccttcgtccccgccatcgcgggcgcacaggaagccgacgcctccaatcaggcg
accaccacgctcgatcgcattgaagtcaccggttcgcgcatccgccaggccagcctggaa
accgcgcagccggtcgtcaccatgtcgcgcgccgaaatccagaagcagggtttcaccagc
gtcgccgacatcgtccagaacatcaccgccagcggctcgccggcgatctcgcgcgccgac
gcgctgtcctcgggcgaagaagtcggcggccaatacgtcgacctgcgcaacctcggcccg
cagcgcaccctggtgctgatcgacggcaagcgcatgggcatcagctcggccggttactcc
gacctggccgcgattcccagctcgatcgtcgagcgcatcgaagtgctgaccgacggcgcg
tccgcgctgtacggctccgacgccatcgccggcgtgatcaacatcatcacccgcaagcgt
ttcgacggcctggaagccagcgcctacctcggccagtacggccagggcgacggcaacaag
gagatctacaacttcgtcatcggccagaccggcgagcgcggttcgatcaccttgggcgcg
gaatacagcaaggaagatccggtcctggccaaggaccgttcgatcacccgttacccgaat
ggcccgcgccatccgttcccgaccgccgacgacaccaacggttggagcccgatcaaccag
tggggcacgctattcgattcggccggtaatccgctgaccgccaaccgcggcacgaccgac
accaagaacccgaacaacttccacccgaccgacgccatcctcgaccaggccaacgccaac
gagcagatgtacctgtcgaccggtctggagcgtcgctcggtgttcgcgaacgccgagttc
gacatcaccgacaacgtgcgcgccaaggccgacgtgctgtacaccgatcgcgaagcgacc
cagcagatcgccggctatccgttccgctccaacggcttcagcagccgctacgcgggcgac
ctgcgcctggacggcaacagcgcgttcaacccgctgggctacgacgccgacttctaccgc
cgtggctgggaagtgccgcgtcagaccaagtccgagctgaccacctaccgcttcagcggc
ggcctggaaggcacgttcgagttcgccggcaagccgtgggattgggacatcggctacgtc
tacaaccagaacaagggcgtcaagacccagaccggcaacctgttcctgccgaacgccgag
aaggcgctgggcccgtcgttcatcgacgccagcggcgtcgcgcgctgcggcaccgccgcg
gctccgatcgccggctgcctggcctggaacccgctgctgggtccggacgtcaacgcgccg
ggttcgatgaacaacaaggaactgcagaagtacctgttcctgccgacccacgacacctcg
accaccgaaacccaggtctacagcctcaacctcagcggcgtgctcgccacgctgccggcg
ggcgacctcggcatcgcggccggttatgaacaccgcaaggaatcggcgcattactcgccc
gacgcgctgctgcagtccggcctgagcaccagcctggccggcagcgaaacccagggcggc
tactcgctcgacgagttctacgtcgaactggccgtgccgttgctgtcggacgtggccttc
gcgaaggaactgtcgttcaacatcgccggccgttactccgactacaacaccttcggcgac
accaccaacggcaagttcagcctgaagtggaagccgatcgacgacctgctgatccgcggc
acctacgcgacgggcttccgcgccccgaccgtggccgacctgtacggcggcgtgggcgag
agcttcgacaactacaccgatccgtgcgacaccgtgttcggcgcggtccgtggcaacgcg
cgttgcgccgccgcggtgccggcgaacttccgtcaggccgcttccggcggttcggcggcg
accggtccgaacgcgcagtccaacaccgcgttcctgtcgggttccaacccgaacctgatc
ccggaaacctccaagtcgaccacgatcggtttcgtctacagcccgagctgggtcagcggc
ctcgacgtcagcctggactggtggaagatcaagatcgacgacgtgatcgcggccgagacc
gtgacctcgctgttgaacaactgctacgtgctcggcatcgacgaagcctgcagccgcttc
gtgcgcagcaccaacccgcgcagcctgggccaggtggtgggcgtgacccgcaccctgatc
aacggcggctaccaggaaaccgcgggttacgacctgggcatctcctaccgtctgcccgag
acccgtttcggcaacttcgcgttcaactggaagacgacctacgtcgactacctggaatac
aagcgcgacagcgagtcgaccacgccggtcgagcagcgcaccagctgggtcgccaacgac
agcgccaacttccgcgtgcgttcgagcttcaacgccgactggagcatgggcgacttcggc
gcgagctggaacgtgcgttactactctggtctgaaggaagagtgcgcgtacgacctggac
ggcggcccggaatgcgacatcccggattaccgttcggcgtacaagggtcaggtgggcgtg
cgtgaggtgggttcgaacaccttccacgacatgcaggtccgctacaacaccccgtggaac
gccaccgtggcggtcggcgcgaacaacgtgttcgaccacctcggccagaccatgtacagc
cagccgaacagcagcttcagctacaacggcagcttcgacatcggccgcttcgtgtacatg
aagtacacccagcgtttctga
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