Lysobacter capsici: LC55x_0990
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Entry
LC55x_0990 CDS
T04162
Name
(GenBank) ABC transporter family protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lcp
Lysobacter capsici
Pathway
lcp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LC55x_0990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_0990
Transporters [BR:
lcp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LC55x_0990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
RsgA_GTPase
AAA_22
AAA_21
AAA_30
AAA_29
AAA_16
AAA_18
P9_TM
P-loop_TraG
Vps55
Motif
Other DBs
NCBI-ProteinID:
ALN84282
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All DBs
Position
1107227..1109062
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AA seq
611 aa
AA seq
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MIFRWFESLIDPFRPAPDTMPPRSVAAFYWHFIRQAWPVFVVLTVVGFFVAIVEVVMFDY
LGKVVDLVNTTPAQALFARHGSELLWMAAVMLIARPICLGLHDLLLNQAVHPSMTNLVRW
QTHRYMLKQSLSFFQNDFAGRVANRIMQTGPSLRESTTQAFDAIWYVIVYSASAVYLFAQ
ADAWLMVPLLVWIVLFIGLMRYFVPRVKERSWRASDARSKLMGRIVDGYSNITTLKLFAH
SRREEQYVAEAMVEQTQRSRDMTRMTTSMGVSISVLNGLLIVGTCALSLWLWHRGAITVG
AIALATGLVIRIHNMSGWIMWTVNGIFEDIGTVQDGIETISRPLTVTDRVDAQPLQVEHG
SVRFENVHFHYGQDSGLIADLDLEVKPGEKIGLVGPSGAGKSTLMNILLRLYDLESGRIL
VDGQDIAGVTQESLRSQIGVVTQDTSLLHRSIRDNLLYGRPEASDAEMFEAVRKARADEF
IPRLVDGEGRVGYDALVGERGVKLSGGQRQRIAIARVLLKNAPILILDEATSALDSEAEA
AIQESLETLMAGKTVIAIAHRLSTIARMDRLVVMDRGHIIETGTHEQLIARDGLYARLWK
RQTGGFVAVDA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgatttttcgttggttcgaatcgttgatcgacccgttccggcccgcgccggacaccatg
ccgccgcgttcggtggcggcgttctattggcatttcatccgccaggcgtggccggtgttc
gtggtcctgaccgtggtcgggttcttcgtcgccatcgtcgaggtggtgatgttcgactac
ctgggcaaggtcgtggatctggtcaacaccacgccggcgcaggcgctgttcgcccggcac
ggcagcgagctgctgtggatggcggcggtgatgctgatcgcgcgtccgatctgcctgggg
ctgcacgacctgctgctcaatcaggccgtgcatcccagcatgaccaacctggtgcgctgg
cagacgcatcgctacatgctcaagcagagcctgagcttcttccagaacgacttcgccggc
cgggtcgcgaaccggatcatgcagaccggtccgtcgttgcgcgagtccaccacccaggcg
ttcgatgcgatctggtacgtgatcgtgtactcggcgtcggcggtgtatctgttcgctcag
gccgatgcctggcttatggtgccgttgctggtatggatcgtgttgttcatcggcttgatg
cgttacttcgtgccgcgggtgaaggaacgttcgtggcgtgcgtcggatgcgcgttccaag
ctgatgggacgcatcgtcgacggctacagcaacatcaccacgttgaaattgttcgcgcac
tcgcggcgcgaagagcaatacgtggccgaggcgatggtcgaacagacccagcgttcgcgc
gacatgacccgcatgaccacgtcgatgggcgtcagcatcagcgtgctcaacggcttgttg
atcgtcggtacctgcgccctgtcgttgtggttgtggcatcgcggcgcgatcacggtcggc
gcgatcgccttggcgaccggtctggtgattcgcatccacaatatgtcgggctggatcatg
tggacggtgaacggcatcttcgaggacatcggcacggtgcaggacggcatcgaaacgatt
tcgcggccgttgaccgtgaccgatcgcgtcgatgcgcagccgttgcaggtcgaacacggc
agcgtgcgtttcgagaacgtgcatttccattacggccaggacagcggcctgatcgcggat
ctggatctggaggtgaagccgggcgagaagatcggcctggtcgggccgtcgggcgcgggc
aagtcgacgctgatgaatattctgctgcggctgtacgatctggaaagcggtcgcatcctg
gtcgacgggcaggacatcgccggcgtcactcaggaaagcctgcgttcgcagatcggcgtg
gttactcaggacacctcgctgctgcaccgctcgatccgcgacaacctgctgtacggccgg
ccggaggccagcgatgcggagatgttcgaggccgtgcgcaaggcgcgtgcggatgagttc
attccgcgcctggtcgatggcgagggccgggtgggctatgacgcgctggtcggcgaacgc
ggggtcaagttgtcgggcggccagcggcagcgcatcgcgatcgcgcgggtgctgttgaag
aacgcgccgatcctgatcctggatgaggcgacctcggcgctggattcggaagccgaggcg
gcgatccaggaaagtctggagaccctgatggccggcaagacggtcatcgcgatcgcgcat
cgcttgtcgaccatcgcgaggatggaccgattggtggtgatggatcgcggccacatcatc
gagaccgggacgcatgagcagttgatcgcgcgcgatgggttgtatgcgcggctgtggaag
cggcagacggggggatttgtggcggtggatgcgtaa
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