Lysobacter capsici: LC55x_1158
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Entry
LC55x_1158 CDS
T04162
Name
(GenBank) ompA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_1158
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_1158
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF748
Motif
Other DBs
NCBI-ProteinID:
ALN84449
LinkDB
All DBs
Position
1304654..1305847
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AA seq
397 aa
AA seq
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MCACGRGDGAAASADPSGTASVPAATADAASPNTTTPTANAAPLTAGDREFPVIPAIVVP
DILGVTPAQRALESSMQDLINPIEGITIKPARCGDGGALINDAGLTHLDAQGNLSRNDGK
GTFNLSADGSGSANYQGGLITVNADGSGSINTGGDEDDEDEGEKAVISVNADGSGSYTGR
GDTIHLDGKGGGSWNGEMGLITYNGDGSGSWNGPQGLITINADGSGTWNGPDGLVRNDGK
GRGTVGTPPREMAMAPIPKLAPAGRFPLLNKFVVPGAPCGVLITLNDKVLFDFDKSDIRP
DAAEVLDTLAEALAKIQAKGMQIRGHTDAKGSDDYNLSLSDRRAQSVVAALRQRGAAKDA
DARGFGESQPVAPNEVDGHDNPSGRQLNRRVEIYVKT
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
ttgtgcgcgtgcgggcgcggcgacggcgccgccgcctcggcggatccatcggggaccgcg
tcggtaccggccgcgacagcggatgcggcttcgccgaatacgacaacgccgaccgcgaac
gccgcgccattgactgccggcgatcgcgaatttccggtcatcccggccatcgtcgtgccc
gacatcctcggcgtgacgccggcgcagcgcgcgctggaaagctcgatgcaggacctgatc
aatccgatcgagggcatcacgatcaagcccgcccgctgcggcgacggcggcgcgctgatc
aacgacgcgggcctgacccacctcgacgcccagggcaatctgtcccgcaacgacggcaag
ggcaccttcaatctgagcgccgacggcagcggttcggccaattaccaaggcgggttgatc
acggtcaacgccgacggttcgggttcgatcaacaccggcggcgatgaggacgatgaggat
gagggcgagaaagccgtcatcagcgtcaacgccgacggctcgggcagttacaccggccgc
ggcgacaccatccatctggacggcaagggcggcggcagctggaacggcgagatgggcctg
atcacctacaacggcgacggctcgggcagctggaacggcccgcagggcctgatcaccatc
aacgccgacggttcgggcacctggaacggccccgacgggctggtgcgcaacgacggcaag
ggccgcggcacggtcggcacgccgccgcgcgaaatggcgatggcgcccatcccgaagctc
gcgccggccggccgtttcccgctgttgaacaagttcgtcgtgcccggcgcgccgtgcggc
gtgctgatcacgctcaacgacaaggtgctgttcgatttcgacaagtccgacatccgtccg
gacgcggccgaagtgctcgatacgctggccgaagccttggccaagatccaggccaagggc
atgcagatccgtggccataccgacgccaagggcagcgacgactacaacctgtcgctgtcc
gatcgccgcgcgcagtcggtggtggcggcgttgcggcagcgcggcgcggcgaaggacgcc
gatgcgcgtgggttcggcgaatcgcaaccggtcgcgccgaacgaggtcgacggccacgac
aatccgtccggccgccagctcaatcggcgggtggagatctacgtcaagacctga
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