Lysobacter capsici: LC55x_1303
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Entry
LC55x_1303 CDS
T04162
Name
(GenBank) methyladenine glycosylase family protein
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
lcp
Lysobacter capsici
Pathway
lcp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC55x_1303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcp03400
]
LC55x_1303
Enzymes [BR:
lcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
LC55x_1303
DNA repair and recombination proteins [BR:
lcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LC55x_1303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
HC2
Motif
Other DBs
NCBI-ProteinID:
ALN84594
LinkDB
All DBs
Position
complement(1488709..1489488)
Genome browser
AA seq
259 aa
AA seq
DB search
MSGYCNIAPNHPVHGEYHDREYGFPQRDESDLFERLILEINQAGLSWETILRKREGFRRA
YDGFVVDKVAAYGQAERLRLLEDAGIIRNRLKVDAAIHNAQVIQGLRASHGGFAQWLDAH
QLLDGRPREKADWIKLFKKTFRFTGGEITNEFLMSLSYLPGAHRESCPAYQRIDKLKPYW
RRAREQAAALKPASKSAGSTARKAGDAKAAPAKTVNKTVANKSVGKPAPAKKAAAKPAAS
KKPIAKKTASAKPAAKKTR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctactgcaatatcgccccaaaccatcccgtccatggcgagtaccacgaccgc
gagtacggcttcccgcaacgcgacgaatcggacctgttcgagcgcctgatcctggaaatc
aaccaggccgggctgagctgggaaaccatcctgcgcaagcgcgagggcttccgccgcgcc
tacgacggcttcgtggtcgacaaggtcgccgcgtacggacaggccgagcgcctgcgcctg
ctcgaggacgccggcatcatccgcaaccggctcaaggtcgatgcggcgatccacaacgcc
caggtgatccagggcctgcgcgccagccacggcggctttgcccaatggctggacgcgcac
caactgctcgacggcaggccgcgcgagaaggccgattggatcaagttgttcaagaagacc
ttccgcttcaccggcggcgagatcaccaacgaattcctgatgagcctgagctatctgccc
ggcgcgcatcgcgaaagctgcccggcctatcagcgcatcgacaagctcaagccgtactgg
cggcgagcgcgcgaacaagccgcggcactgaagcccgcttcgaagtccgccggatccaca
gcgcggaaagccggcgacgcaaaggccgcgcccgccaagaccgtcaataaaactgtcgcc
aacaagagcgtcggcaagccggcgccagccaagaaagcagccgccaaaccggcggcaagc
aagaaacccatcgcgaagaaaaccgcgagcgccaagcccgcggcgaagaagacccgctga
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