Lysobacter capsici: LC55x_1413
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Entry
LC55x_1413 CDS
T04162
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_1413
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_1413
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ALN84704
LinkDB
All DBs
Position
complement(1594662..1596746)
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AA seq
694 aa
AA seq
DB search
MRIVTLRIAALALASAVAFDAVAFDGVAQSGAAPTPDDASAKTLGTVRVLGRYARGRAVD
SPEAARARLDQRAGATALVDGESYRDGRVSTLTDALGYAPGVFVQPRFGAEEARLSIRGS
GLQRTFHGRGLELLQDGSPLNLADGGFDFQAVEPLATRYIEVYRGANALEFGAATLGGAI
NFVSPTGYDAAPATLRVEAGAFDYRRGQIALAGVRGDADGYLSLSGINQTGYRDHAEQEN
YRLFANAGYRFSDTLDARVYLTHVDTRSALPGNLTLDESRRDPRLAAPGNLALNQRRDYR
LDRIAGKLAWAASERSTLTVSAYYADKSLHHPIFQVLQQDSSDVGIDVRWRHESQWLGLR
NVLIAGAAFAQGDIDDDRYFNVAGRAGARSNRFDQRARNRKLYLENQTWLAPQWVLSLGA
QALDADRRSRDRFITGGRDESFAADYSGISPKLGLRYVIDEHAQLYANLSRSLEPPSFGE
LSGGPGITPVDKQRADSGEVGLRLNGDALSLDLAVYRARVRGELLSLSDGNGNPLGTVNA
DRTVHQGIELGLDWKPAAQWTVSANYLYNDFRFDGDRVYGDNDLAGVPPQQLRAELRWSP
GEYLYLAPSVEWTPQSYYIDHANSFKAPGYTIAGLRIGGRLAKQWSWFADARNLGDRKWI
ASTNVIADARGLDGRNFLPGDGRAVYFGVEWRKD
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgtcacacttcgtatcgccgcgctcgcattggcgagcgccgtcgccttcgat
gcggtcgccttcgatggcgtcgcgcagtccggtgcggcgccgacacccgacgacgcgtcg
gcaaaaacgctaggcacggttcgcgtcctgggtcgctacgcgcgaggccgcgcggtcgac
agccccgaggccgcgcgcgcgcgtctggaccagcgcgccggcgcgaccgcgctggtcgac
ggcgagtcgtaccgcgacggccgcgtcagcaccttgaccgatgcattggggtacgcgccg
ggggtgttcgtgcaaccgcgcttcggcgccgaggaagcgcgcctgtcgatccgcggctcg
ggcctgcagcgcaccttccatggccgcggcctggaactgctgcaggacggcagcccgctc
aacctcgccgacggcggtttcgatttccaggcggtcgagccgctggcgacgcgctatatc
gaggtctaccgcggcgccaacgcgctggagttcggcgcggccacgctcggcggcgcgatc
aacttcgtttcgccgaccggttacgacgccgcgcccgcgaccctgcgcgtcgaggccggc
gcgttcgactatcgccgcggccagatcgcgctggccggcgtgcgcggcgacgccgacggc
tatctgagcctgagcggcatcaatcaaaccggttatcgcgaccatgccgaacaggaaaat
tatcgcttgttcgccaatgccggctatcgcttcagcgacacgctcgacgcgcgcgtctac
ctgacccatgtcgacacgcgctcggccctgcccggcaatctgaccctcgacgagtcgcgc
cgcgatccgcgcctggccgcgcccggcaacctcgccttgaaccagcgccgcgactaccgc
ctcgaccgcatcgccggcaagctggcctgggccgcgtccgaacgcagcacgctgaccgtg
tcggcctattacgccgacaagtcgctgcaccacccgatcttccaggtgctgcagcaggac
agctccgacgtcggcatcgatgtccgctggcgccacgagtcgcaatggctgggcctgcgc
aatgtgctgatcgcaggcgccgccttcgcccagggcgacatcgacgacgatcgttacttc
aacgtcgcaggccgcgccggcgcgcgcagcaaccgcttcgatcaacgcgcgcgcaatcgc
aaactctatctggagaaccagacctggctggcgccgcaatgggtgctgtcgctgggcgcg
caagcgctcgacgctgatcgccgttcgcgcgatcgcttcatcaccggcggccgcgacgag
agtttcgccgccgactattccggcatcagccccaagctcggcctgcgctatgtgatcgac
gagcacgcccagctctatgccaacctcagccgcagcctggaaccgccgagcttcggcgaa
ctcagcggcggccccggcatcactccggtcgacaagcaacgcgcggacagcggcgaggtc
ggcctgcgcctcaacggcgacgcgctgtcgctggacctggccgtgtaccgcgcgcgggtc
cgcggcgaactgctttcgctcagcgacggcaacggcaatccactgggcacggtcaatgcc
gatcgcaccgtgcatcagggcatcgaactcggcctggactggaagcccgcggcgcagtgg
accgtgtcggccaactacctctacaacgatttccgtttcgacggcgaccgcgtctacggc
gacaacgacctggccggcgtgccgccgcaacaactgcgcgccgaattgcgctggtcgccg
ggcgagtatctgtacctggcgccgagcgtggaatggacgccgcagtcgtactacatcgac
cacgccaacagtttcaaggcgccgggctacaccatcgccggcctgcgcatcggcggccgg
ctcgcgaagcaatggtcgtggttcgccgatgcgcgcaacctcggcgaccgcaagtggatc
gccagcaccaacgtgatcgccgacgcgcgcgggctggacgggcgtaattttttgccgggc
gatgggcgcgcggtgtatttcggggtggagtggcggaaggattga
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