Lysobacter capsici: LC55x_1662
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Entry
LC55x_1662 CDS
T04162
Name
(GenBank) ABC transporter family protein
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_1662
Transporters [BR:
lcp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LC55x_1662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
DUF87
AAA_16
AAA_22
AAA_25
ABC_ATPase
RsgA_GTPase
AAA_18
AAA_30
nSTAND3
Sigma54_activat
AAA_29
APS_kinase
AAA_28
MMR_HSR1
AAA_33
TsaE
NACHT
Motif
Other DBs
NCBI-ProteinID:
ALN84951
LinkDB
All DBs
Position
complement(1865111..1866937)
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AA seq
608 aa
AA seq
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MTLTRRLWPTIWYYRGRVVLGVGLVLATKLATTGVPLLLKQLIDALDQKPTPLTVPVLLL
CTYGALRLASSVFQELRGIVFARVLARTSREVALRVFAHVHMLSLRFHMDRRTGAVIRDL
ERGMSSVSELLDTALYTVVPTVIEIALVTAILVGRYDMSFAAITLGTLAAYLLFTVRMTE
WRQRYYKAMNEADTEANASAVDSLLNYETVKYFNNEGFEARRFDQRLRNLEDTGVKSLKA
ASLLGIGQAAIIATGLTLLLWRATDGVVAGRMSLGDLVLVNAFLLQLAAPLSYLGMIYRE
TKQTLANLERMFALLDEPVEVRDRDNAPELAVSGGEVRFEQVSFNYGEREVLAAIDFVIP
AGRTVAVVGSTGAGKSTLARLLYRSYDVAGGRITVDGQDLREVTQDSLRRQIGVVPQDTV
LFNDSLYYNIAYGRPEASREEVFDAARAAHIHEFIQTLPQGYGTNVGERGLKLSGGEKQR
IAIARTLLKRPAILIFDEATSALDTHTEHGIQRELDQAAQGRTTLVIAHRLSTVVGADEI
LVLERGRIVERGSHASLLAASGRYAALWAMQQRGHDTAAPSHTGATAVPGESVPHTHPSS
TVTTQDLS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgactcgccggctgtggccgacgatctggtattaccgcggccgggtcgtgctg
ggcgtggggctggtgctggcgaccaagttggcgaccaccggcgtgccgctgctgctcaag
cagttgatcgatgcgctggatcaaaagcccaccccgctgaccgtgccggtgctgctgctg
tgcacctacggcgcgctgcggctggcgtcgtcggtgttccaggaactgcgcggcatcgtg
ttcgcgcgggtgctggcgcgcacctcgcgcgaggtcgcgctgcgggtgttcgcgcacgtg
cacatgctgagcctgcgcttccatatggaccgccgtaccggcgcggtcatccgcgatctc
gagcgcggcatgtcgtcggtgtcggaactgctcgacaccgcgctgtacacggtggtgccg
acggtgatcgagatcgcgctggtgaccgcgatcctggtcggccgctacgacatgagcttc
gccgcgatcaccctgggcacgctggcggcctatctgctgttcaccgtgcgcatgaccgag
tggcgccagcgctactacaaggccatgaacgaagccgacaccgaggccaacgccagcgcg
gtggattcgctgctgaactacgaaacggtcaagtacttcaacaacgaaggcttcgaagcc
cgacgtttcgatcaacgcctgcgcaacctggaggacaccggggtcaagagcctcaaggcc
gcgtcgctgctcggcatcggccaggccgcgatcatcgccaccggcctgaccttgctgttg
tggcgcgcgaccgatggcgtggtcgccgggcgcatgagcctgggcgatctggtgctggtc
aacgcgttcctgctgcaactggccgcgccgctgagttacctgggcatgatctaccgcgag
accaagcagaccctggccaatctggagcggatgttcgccctgctcgacgaaccggtcgag
gtgcgcgatcgcgacaacgcgccggaattggccgtgtccggcggcgaagtgcgcttcgag
caggtgtcgttcaactacggcgaacgcgaagtgctggcggcgatcgatttcgtcattccg
gccggccgcaccgtggccgtggtcggcagcaccggcgccggcaaatcgactctggcgcgg
ctgctgtaccgctcctacgacgtcgccggcggtcgcatcaccgtcgacggccaggacctg
cgcgaggtcacccaggattcgctgcgccggcagatcggcgtggtcccgcaggacacggtg
ctgttcaacgattcgctgtactacaacatcgcctacggccgccccgaagccagccgcgag
gaggtgttcgacgccgcccgcgccgcgcacatccacgagttcatccagaccctgccgcaa
ggctacggcaccaacgtcggcgaacgcgggctgaaactgtcgggcggcgagaaacagcgc
atcgcgatcgcgcgcaccttgctcaagcggccggcgatcctgatcttcgacgaagcgacc
tcggcgctggacacgcataccgagcacggcatccagcgcgaactcgaccaggccgcgcaa
ggccgcaccaccctggtgatcgcgcaccgattgtcgaccgtggtcggcgccgacgaaatc
ctggtgctcgaacgcggccgcatcgtggaacgcggcagccacgcatccctgctggccgcg
tccggccgctacgccgcgctatgggcgatgcagcaacgcggacacgacaccgccgcgccg
tcgcacaccggcgcaacggccgttcccggcgaatccgtaccacacacccatccatcctcc
accgttacgacacaggacctgtcatga
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