Lysobacter capsici: LC55x_1761
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Entry
LC55x_1761 CDS
T04162
Name
(GenBank) bacterial regulatory helix-turn-helix, AraC family protein
KO
K07506
AraC family transcriptional regulator
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcp03000
]
LC55x_1761
Transcription factors [BR:
lcp03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LC55x_1761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ALN85048
LinkDB
All DBs
Position
1964511..1965437
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AA seq
308 aa
AA seq
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MSDALSVSPPPPPPPAIPVVSHPDPGQRELMRRELSLGDGVLFAFAAERIAEPTQWSVHH
DRHTLIVHLDGTMRRLETRIEGVGRLRAPAAAGDLWLIPAGRRYQGEARGGEIAYAELTI
DPARYPGLRDTPAGGTDLAARMKHHDPLVHALAARLAQLSGEPDDLAAMLCDTLSQSLCL
HLLREHGAAAAPSRPPREPSPRLSEPQRRRVEDYIASHLDQPIRLAALAALTGLSTHRLL
IAFRASFGATPIQYVLAQRLQRVCMRLRRGDDDITTIAIGSGFSSHSHLSAVFKRQYGIT
PSEYRQRG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgcgctgtcagtttctccgccgccgccgccgccgccggcgatcccggtcgtg
tcccatcccgatccgggccaacgcgagctgatgcgccgcgagctgtcgctgggcgacggc
gtgcttttcgccttcgccgccgaacgcatcgccgagccgacccagtggagcgtgcatcac
gaccgccacaccctgatcgtgcatctcgacggcacgatgcggcggctggaaacccgcatc
gaaggcgtcggccgcctgcgcgcgccagccgcggccggcgatctgtggctgattccggcc
ggccggcgttaccagggcgaggcgcggggcggcgagatcgcctacgccgaattgaccatc
gacccggcccgctatcccggcctgcgcgacaccccggccggcggcaccgatctggccgcg
cgcatgaaacaccacgacccgctggtgcatgcgctggccgcgcggctcgcccagctgagc
ggcgaacccgacgacctggcggcgatgctgtgcgacacgttaagccagagcctgtgcctg
catctgctgcgcgaacacggcgccgccgccgcgccgtcgcggccgccgcgcgagccgtcg
ccgcggttgagcgagccgcagcggcgccgggtcgaggactacatcgcgtcgcatctggac
cagccgatccgtctggccgcgctggccgcgctgaccggcctgagcacccatcgcctgctg
atcgcgttccgcgccagcttcggcgcgacgccgatccagtacgtgctcgcgcagcgcctg
caacgggtctgcatgcgcctgcgtcgcggcgacgacgacatcaccacgatcgcgatcggc
agcggtttttccagccacagtcatctgtcggccgtgttcaagcgtcagtacggcatcacc
ccgagcgagtaccgccagcgcggctga
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