Lysobacter capsici: LC55x_1821
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Entry
LC55x_1821 CDS
T04162
Name
(GenBank) bacterial DNA-binding family protein
KO
K03530
DNA-binding protein HU-beta
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcp03032
]
LC55x_1821
03036 Chromosome and associated proteins [BR:
lcp03036
]
LC55x_1821
03400 DNA repair and recombination proteins [BR:
lcp03400
]
LC55x_1821
DNA replication proteins [BR:
lcp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LC55x_1821
Chromosome and associated proteins [BR:
lcp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LC55x_1821
DNA repair and recombination proteins [BR:
lcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LC55x_1821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_bac_1
VWA_3
Motif
Other DBs
NCBI-ProteinID:
ALN85103
UniProt:
A0A0S2FNJ2
LinkDB
All DBs
Position
2023209..2023481
Genome browser
AA seq
90 aa
AA seq
DB search
MNKAELVGAVAETAELSKTDATAAVDALIDVVTKALKKGDTVTLVGFGTFQVRQRAARQG
RNPKTGETIKIAASQNPSFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggccgaactcgtaggcgccgttgccgaaaccgccgagctgtcgaagaccgac
gctaccgccgccgtcgatgcactgatcgacgtcgtcaccaaggcgctcaagaagggcgac
actgtcacgctcgtaggcttcggcaccttccaggtgcgccagcgcgccgcgcgccagggc
cgcaacccgaagaccggcgagaccatcaagatcgcggcttcgcagaatccttccttcaag
gctggcaaggcgctgaaggatgctgtaaactaa
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