Lysobacter capsici: LC55x_2010
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Entry
LC55x_2010 CDS
T04162
Name
(GenBank) tonB dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_2010
Transporters [BR:
lcp02000
]
Other transporters
Pores ion channels [TC:
1
]
LC55x_2010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ALN85288
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Position
2225688..2228216
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AA seq
842 aa
AA seq
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MIARQSSRKALSWAIALSLASLAASAQAQQAAAPAQEEEAKTLAGLTVTAQKREEAMQDV
PISITALPQQLLQDSGVRDVKDVQVLVPGLTVSSTQSEVQTVARIRGIGTVGDNAGLESS
VGVVVDGVYRPRNGVGFGDLGEIERIEVLKGPQGTVFGKNTSAGVINVITRRPTYDTTVE
GEFTVGNYGALGAVGSLNTTIGENAAFRIYGAKRKRDGFTDVEIGRGPRAEREDGDQNFH
TLRGQLLFEPTENLDINLIADFTSREENCCVGLTTVRGPTSAIINGLVGGIGVAPVADPF
ARRAWSNRPTTQDIKDKGLSAEVNWITPWFNGATLTSITASRDWQAINGLDFDFTTADII
YRNPNPNESFTGFKQFSQEFRLTGATDKVDWMFGLFYADEDLKRNDSYSIGAAYEPYLST
AVLGQIASRFPAGTVNMANAATFLSQAAGRPFGSNFAGLGALDRYKQNSSSVALFTNNTW
HATDKLDLTLGLRYTKENKELDSVYSNPNGGLGCGAALGNPARVGQALAARGVPVAALGA
LVPQVVGFMCLPWANRLHNGRVTNQERDEKEWSGTIKAAYRWNEHVMGYASAARGYKAGG
FNLDRVQSSNGLSAGTAGITPVNDTSFPGEFVDSYELGAKTTWAGGNLLLNATLFHQTYS
DFQLNSFLGTSFVVRSIPEVVSQGIDTEILWQPGIKGLMLQGGVMYADTKYGNDPLPDAD
LAKLPGARASFAPLWSASASVTYQWDFGSSLIGRANIGAKYSSDYNTGSDLDPEKGQEAY
TVVNARVGIGAKSRRWMVEAWALNLFDEEYKQVGFDAPLQTGSWNAFLGAPRTYGVTLRV
MY
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctcgccagtcgagtcgtaaagccttgtcctgggccatcgcattgagcctggcc
tcgctcgccgcgagcgcgcaggcgcaacaagccgccgcacccgcgcaggaagaggaagcc
aagaccctggccggcctcaccgtcaccgcgcaaaagcgcgaggaggcgatgcaggacgtg
ccgatctcgatcaccgccttgccgcagcagttgctgcaggacagcggcgtgcgcgacgtc
aaggacgtgcaggtgctggtgcccggcctgaccgtcagcagcacccagagcgaagtgcag
accgtcgcgcgcatccgcggcatcggcacggtcggcgacaacgccggcctggaatcctcg
gtcggcgtggtcgtcgacggcgtctaccgtccgcgcaacggcgtgggcttcggcgacctg
ggcgagatcgaacgcatcgaagtgctcaagggcccgcagggcacggtgttcggcaagaac
acctcggccggcgtgatcaacgtgatcacccgccgcccgacctacgacaccacggtcgag
ggcgaattcaccgtcggcaactacggcgcgctcggcgcggtcggctcgctcaacaccacc
atcggcgagaacgccgcgttccgcatctacggcgccaagcgcaagcgcgacggtttcacc
gatgtcgagatcggccgcggcccgcgcgccgagcgcgaagacggcgaccagaacttccac
accctgcgcggccagttgctgttcgaaccgaccgaaaacctcgacatcaacctgatcgcc
gacttcaccagccgcgaagaaaactgctgcgtcggcctgaccacggtgcgcggcccgacc
tcggcgatcatcaacggcctggtcggcggcatcggcgtggcgccggtcgccgatccgttc
gcgcgccgcgcctggagcaaccgtccgaccacccaggacatcaaggacaagggcctgtcg
gccgaggtcaactggatcacgccgtggttcaacggcgcgaccctgacctcgatcaccgcc
tcgcgcgactggcaggcgatcaacggcctggatttcgacttcaccaccgccgacatcatc
taccgcaatccgaacccgaacgaatcgttcaccggcttcaagcagttcagccaggaattc
cgcctgaccggcgcgaccgacaaggtcgactggatgttcggtctgttctatgccgacgaa
gacctcaagcgcaacgattcctacagcatcggcgcggcctacgagccgtacctgtcgacc
gcggtgctcggccagatcgcctcgcgcttcccggccggcacggtcaacatggccaacgcc
gcgaccttcctgtcgcaggccgccggccgtccgttcggcagcaacttcgccgggctcggc
gcgctcgatcgttacaagcagaacagcagcagcgtcgccttgttcaccaacaacacctgg
catgcgaccgacaaactcgacctgaccttgggcctgcgctacaccaaggaaaacaaggaa
ctcgattcggtctacagcaatcccaacggcggcctgggctgcggcgcggcgctgggcaat
ccggcccgggtcggccaggcgctggccgcgcgcggcgtgccggtcgcggcgctgggcgcg
ctggtgccgcaggtggtcggcttcatgtgtctgccgtgggccaacaggctgcataacggc
cgcgtgaccaaccaggaacgcgacgagaaggaatggtcgggcacgatcaaggccgcgtac
cgctggaacgaacacgtcatgggctacgcctcggccgcgcgcggctacaaggccggcggc
ttcaacctcgatcgcgtgcagtcgtcgaacggtttgtcggccggcaccgccggcatcact
ccggtcaacgacacctcgttcccgggcgagttcgtcgacagctatgagctgggcgccaag
accacctgggccggcggcaacctgctgctcaacgcgaccttgttccatcagacctacagt
gacttccagctcaacagcttcctgggcaccagcttcgtggtgcgctcgattccggaagtg
gtctcgcagggcatcgacaccgaaatcctctggcagcccggcatcaaggggctgatgctg
cagggcggggtgatgtacgccgacaccaagtacggcaacgatccgctgcccgatgcggac
ctggccaaattgccgggcgcgcgcgcgagcttcgcgccgttgtggtcggcctcggcgtcg
gtgacctatcagtgggatttcggttccagcctgatcggccgcgccaacatcggtgcgaag
tattcctccgactacaacaccggctcggacctggatccggagaagggccaggaggcctac
accgtggtcaacgcgcgcgtcggcatcggcgccaagagccgccgctggatggtcgaggcc
tgggccttgaacctgttcgacgaggagtacaagcaggtcggtttcgacgcgccgctgcag
accggttcgtggaacgccttcctcggcgcgccgcgcacctacggcgtgaccttgcgggtg
atgtactga
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