Lysobacter capsici: LC55x_2024
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Entry
LC55x_2024 CDS
T04162
Symbol
kdpD
Name
(GenBank) sensor protein KdpD
KO
K07646
two-component system, OmpR family, sensor histidine kinase KdpD [EC:
2.7.13.3
]
Organism
lcp
Lysobacter capsici
Pathway
lcp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LC55x_2024 (kdpD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcp01001
]
LC55x_2024 (kdpD)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lcp02022
]
LC55x_2024 (kdpD)
Enzymes [BR:
lcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LC55x_2024 (kdpD)
Protein kinases [BR:
lcp01001
]
Histidine kinases
OmpR family
LC55x_2024 (kdpD)
Two-component system [BR:
lcp02022
]
OmpR family
KdpD-KdpE (potassium transport)
LC55x_2024 (kdpD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdpD
HATPase_c
DUF4118
HisKA
Usp
DUF2768
AAA_30
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ALN85300
LinkDB
All DBs
Position
complement(2239616..2242291)
Genome browser
AA seq
891 aa
AA seq
DB search
MGELQRQGAGRLTIFLGAAPGVGKTYTMLGRARELQRRGVDVVVGIVETHGRAETLALVE
GLDVLPRKRLEYQDRTLEEMDLDALLARKPKVALVDELAHRNAPGSRHERRWQDVLELLD
AGIDVYTTINIQHLESLNDVIHRITGVRVSETVPDALFDRLRDIVLVDLPPRELIERLQQ
GKVYVPEQAAHALQAFFSPSNLTALRELAMQTAADRVDSDLREAQTARGLPGVPLRRAVL
VAIDGLGQSEYLVRVARRIAERRDSPWIVATVQAGNAPAEARQSELDRAFALARRLGGEA
VVLHGNSVVDALLDHAERAGVSTIVLGRTRERPLARMVNRTLTQQLIQRGAHYELTIVST
PEARARARRSLRDSGGRLRGLLTRSDAGLAVVAATFATALAWVAERWIGLGDLSLIFIVA
VVVVAARTRMTAAVIASVLCFLAYNFFFIEPRYTLLIGARQGVATVLLFLAAALVAGRLA
SKLRMQVLALRASNAHATELQTLGRELATAADVGQVVHAGRKALKRSLGVEAFVYIGAAP
LRGEQLPEMSDKDRAAADWSLKHRQSAGRYTDTLAGSEWWLLPLKGDSSADAPAAGVVGL
RFPASLTRLGAEQRRLAEAMTDDIAQAILRTRLVADLEDSRVSGETERLRSALLSSVSHD
LRSPLASIIGAASSLDHYAEAMPREDRHSLLETIRIEGERLDRYIQNLLDMTRLGHGGLA
LNRDWIGVDELIGSAVTRLQRYEPHARFDVRLQAGLGPIWVHPALIEQALFNVLENAVKF
SPPDTAVVIDARRVDAEPGAATDQVLRIDVSDRGPGIPEDERARIFDMFYSVERGDRGRQ
GTGLGLAICQGMIGAHGGSVVALPGLADEQGRRGTTIRITLPPIEPVAATP
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactgcaacgccagggcgccggtcgcctgaccattttcctgggcgccgcgccc
ggtgtcggcaagacctacaccatgctcggccgcgcccgcgagctgcagcgccgcggcgtc
gacgtggtggtcggcatcgtcgaaacccacggccgcgccgaaaccctcgctctagtcgaa
ggcctcgatgtgctgccacgcaagcggctggagtaccaggaccgcacgctcgaggaaatg
gacctcgacgcgctgctggcgcgcaaacccaaggtcgccctggtcgatgaactcgctcac
cgtaatgcgcccggcagccgccacgaacgacgctggcaggatgtgctcgaactgctcgac
gccggcatcgacgtctacaccacgatcaacatccagcacctggaaagcctcaacgacgtc
atccaccgcatcaccggcgtgcgcgtcagcgagaccgtgcccgatgcgctgttcgatcgg
ctgcgcgacatcgtgctggtcgatctgccgccgcgcgaactgatcgaacgcctgcaacag
ggcaaggtctacgtgcccgaacaggccgcgcatgcgctgcaggcattcttctcgccgtcg
aacctgaccgccttgcgcgaactggcgatgcagaccgccgccgaccgcgtcgacagcgat
ctgcgcgaagcgcagaccgcgcgcggcctgcccggcgtgccgctgcggcgcgcggtgctg
gtcgcgatcgacggcctgggtcaatccgaatacctggtgcgggtcgcgcgccgtatcgcc
gaacgccgcgattcgccgtggatcgtggcgacggtgcaggccggcaatgcacccgctgaa
gcgcgtcagtccgaactcgaccgcgccttcgcgctcgcgcgccggctcggcggcgaggcg
gtggtgctgcacggcaacagcgtggtcgatgccctgctcgatcatgccgaacgcgccggc
gtgtcgaccatcgtgctcggccgcacccgcgagcggccgctcgcgcgcatggtcaaccgc
accctgacccagcaattgatccagcgaggcgcgcattacgaactcaccatcgtcagcacc
ccggaagcgcgcgcgcgtgcgcgccgctcgctgcgcgatagcggcggccggctgcgcggc
ctgctgacccgcagcgacgcgggcctggccgtggtcgcggcgaccttcgccaccgcgctg
gcctgggtcgccgaacgctggatcggcctgggcgatctgtcgctgatcttcatcgtcgcg
gtggtggtggtcgccgcgcgcacccgcatgaccgcggcggtgatcgcctcggtgctgtgc
tttctggcctacaacttcttcttcatcgaaccgcgctacaccttgctgatcggcgcgcgc
cagggcgtggcgacggtgctgctgttcctggccgcggcgctggtcgcaggacgcctggcc
tcgaagctgcgcatgcaggtgctggcgctgcgcgcatccaatgcgcacgcgaccgaactg
cagaccttgggccgcgaactggccacggccgccgacgtgggccaggtcgtgcatgccgga
cgcaaggcgctcaagcgttcgctcggcgtggaagccttcgtctacatcggcgccgcgccg
ctgcgcggcgagcagttgccggagatgagcgacaaggatcgcgccgcggccgactggagc
ttgaagcaccgccaatccgccggccgctacaccgacaccctggccggatcggaatggtgg
ctgttgccgctcaagggcgacagctcggccgacgcgccggccgccggcgtggtcggcctg
cgctttccggcttcgttgacgcgactgggcgcggaacagcgccgcctggccgaagcgatg
accgacgatatcgcgcaagcgattctgcgcacacgattggtcgccgacctggaagactcg
cgggtcagcggcgagaccgagcggctgcgctcggcgctgctgtcgtcggtctcgcacgat
ctgcgctcgccgctggcctcgatcatcggcgcggccagcagcctggatcactacgccgag
gcgatgccgcgcgaggaccgccacagcctgctggaaaccatccgcatcgaaggcgagcgg
ctggaccgctacatccagaacctgctcgacatgacccggctcggccacggcgggctggcg
ctcaatcgcgactggatcggcgtggacgaactgatcggctcggcggtgacgcgcctgcaa
cgctacgaaccccacgcgcgcttcgacgtgcgcctgcaggccgggctcggcccgatctgg
gtgcatccggcgctgatcgaacaggcgctgttcaacgtgctcgagaacgcggtgaagttc
tcgccgcccgacacggcggtggtgatcgacgcgcgccgggtcgacgccgagcccggcgcg
gctaccgatcaagtcctgcgcatcgacgtcagcgatcgcggcccgggcattcccgaggac
gaacgcgcgcgcatcttcgacatgttctacagcgtcgagcgcggcgatcgcggccgccag
ggcaccggcctgggcctggcgatctgccagggcatgatcggcgcgcacggcggcagcgtg
gtcgccctgcccggcctggccgacgagcaaggtcgccgcggcaccacgatccgcattacc
ctgccgcccatcgaacccgtcgcggccaccccatga
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