KEGG   Lysobacter capsici: LC55x_2172
Entry
LC55x_2172        CDS       T04162                                 
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
lcp  Lysobacter capsici
Pathway
lcp00020  Citrate cycle (TCA cycle)
lcp00190  Oxidative phosphorylation
lcp00650  Butanoate metabolism
lcp00720  Other carbon fixation pathways
lcp01100  Metabolic pathways
lcp01110  Biosynthesis of secondary metabolites
lcp01120  Microbial metabolism in diverse environments
lcp01200  Carbon metabolism
Module
lcp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lcp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lcp_M00149  Succinate dehydrogenase, prokaryotes
lcp_M00982  Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:lcp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    LC55x_2172 (sdhA)
   00650 Butanoate metabolism
    LC55x_2172 (sdhA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    LC55x_2172 (sdhA)
   00720 Other carbon fixation pathways
    LC55x_2172 (sdhA)
Enzymes [BR:lcp01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     LC55x_2172 (sdhA)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 Thi4 GIDA DAO HI0933_like FAD_binding_3
Other DBs
NCBI-ProteinID: ALN85447
LinkDB
Position
2400194..2401987
AA seq 597 aa
MASAYKIQEHKFDMIVVGAGGAGLRATFGLAQKGLKTACITKVFPTRSHTVAAQGGISAA
LGNMGEDDWRYHFFDTVKGSDWLGDQDAIEYMCKEAIPAIIELEHQGVPFSRTDEGKIYQ
RPFGGMTTKYGEGPPAQRTCAAADRTGHAILHTLYQQSLAHDAQFFIEYFALDLIMDETG
ACRGVLALDMAEGTLHLFRAQGTVLATGGYGRAYFSATSAHTCTGDGGGMALRAGLGLQD
MEFVQFHPTGIYGAGCLITEGVRGEGGILRNSNGERFMERYAPSVKDLAPRDMVSRSMTI
EIREGRGVGEHKDHILLDLTHLGPEVIHEKLPGIAESARIFANVDVEKEPIPVIPTVHYN
MGGIPTNYHGEVVQLKDGNPDAVVEGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVA
NRCAETIKPGGPHAKLPADACDAALARLDKLRNASGSTPTSVIRDKMQRTMQADAAVFRT
GETLSDGVRKMREIHALFADVKVSDRSLIWNSDLIETYELSNLLSQALATIVSAENRTES
RGAHAREDFPTRNDDEWQKHTLCYVDEKGSTSIDYRPVHNYTLTDDVAYVPPKERKY
NT seq 1794 nt   +upstreamnt  +downstreamnt
gtggcctctgcctacaagattcaagaacacaagttcgacatgatcgtggtcggcgccggc
ggcgccggtctgcgcgccaccttcggtctggcccagaagggcctgaagaccgcgtgcatc
accaaggtcttcccgacccgttcgcacaccgtggccgcgcagggcggcatctccgccgcg
ctgggcaacatgggcgaggacgactggcgttaccacttcttcgataccgtcaagggttcg
gactggctgggcgaccaggacgcgatcgagtacatgtgcaaggaggccatcccggccatc
atcgaactcgaacaccagggcgtgccgttctcgcgcaccgacgagggcaagatctatcag
cgcccattcggcggcatgaccaccaagtacggcgaaggcccgccggcgcagcgcacctgc
gccgccgccgaccgcaccggccacgcgatcctgcacacgctgtatcagcagtcgctggcg
cacgacgcgcagttcttcatcgaatacttcgccctcgacctgatcatggacgagaccggc
gcctgccgcggcgtgctcgcgctcgacatggccgaaggcaccctgcacctgttccgcgcc
cagggcacggtgctggcgaccggcggctacggccgcgcgtacttctccgcgacctcggcc
cacacctgcaccggcgacggcggcggcatggcgctgcgcgccgggctgggcctgcaggac
atggaattcgtgcagttccacccgaccggcatctacggcgccggctgcctgatcaccgaa
ggcgtgcgaggcgagggcggcatcctgcgcaacagcaacggcgagcgcttcatggagcgc
tacgcgccgagcgtgaaggacctcgccccgcgcgacatggtcagccgttcgatgaccatc
gaaatccgcgaaggccgcggcgtcggcgagcacaaggatcacatcctgctcgacctgacc
cacctcggcccggaagtgatccacgaaaaactccccggcatcgccgagtcggcgcgcatc
ttcgccaacgtcgacgtcgagaaggagccgatcccggtcattccgaccgtccactacaac
atgggcggcattccgaccaactaccacggcgaagtcgtgcagttgaaggacggcaacccg
gacgcggtggtcgaaggcctgtacgcgatcggcgaagcggcctgcgtgtcggtgcacggc
gccaaccgcctgggttcgaactcgctgctcgatctggtggtgttcggtcgcgcggtggcc
aaccgctgcgccgagacgatcaagcccggtggcccgcacgccaagttgccggccgacgcc
tgcgacgcggcgctcgcgcgcctggacaagctgcgcaacgccagcggcagcaccccgacc
tcggtgatccgcgacaagatgcagcgcaccatgcaggccgacgcggcggtgttccgcacc
ggcgaaacgctgagcgacggcgtgcgcaagatgcgcgagatccacgcgctgttcgccgac
gtcaaggtcagcgaccgctcgctgatctggaactcggacctgatcgagacctacgagctg
tcgaacctgctgagccaggcgctggcgacgatcgtgtcggccgagaaccgcaccgagtcg
cgcggcgcgcatgcgcgcgaggatttcccgacgcgcaacgacgacgagtggcagaagcac
accctgtgctatgtcgacgagaagggcagcaccagcatcgactaccgtccggtgcacaac
tacaccctgaccgacgacgtggcctacgtgccgcccaaagaacgcaagtactga

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