Lysobacter capsici: LC55x_2316
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Entry
LC55x_2316 CDS
T04162
Symbol
rpsA
Name
(GenBank) ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
lcp
Lysobacter capsici
Pathway
lcp03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LC55x_2316 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lcp03011
]
LC55x_2316 (rpsA)
Ribosome [BR:
lcp03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LC55x_2316 (rpsA)
Bacteria
LC55x_2316 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
ALN85584
LinkDB
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Position
2538404..2540092
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AA seq
562 aa
AA seq
DB search
MTESFAELFEASQQYLAKLKPGAIVTGTVVEVRSDVVVINAGLKSEGIVPIEQFRNDAGE
IDVAVGDEVKVALDSIENGFGETVLSREKAKRAMVWDELEEALEKNETITGRISGKVKGG
FTVDIKDVRGFLPGSLVDVRPVRDSAYLEGKELEFKLIKLDRKRNNIVVSRRAVVESEYS
VEREQLMEKLQEGAILKGVVKNLTDYGAFVDLGGIDGLLHITDMAWKRVRHPSEVVEVGQ
ELDVRVLKYDRERNRVSLGLKQLGEDPWDNIARRYPANTRVFGKVSNVTDYGAFVEIEPG
VEGLVHVSEMDWTNKNVNPSKIVQVGDEVQVMVLDVDEERRRISLGMKQVTSNPWETFAA
IHKKGDKVEGQIKSITDFGIFIGLDGGIDGLVHLSDISWNTTGEDIVRNFKKGDTLEAVV
LAVDPERERISLGVKQLEQDPMGQYVASNAKGSIVKGVVKEVDAKGATIELADGIEGYVA
ARDIAKERVEDASTYLKVGQEVEAKIIGTDRKGRSMQLSIKAKDEAEQQEALSDYNHRAS
EASSGTTSLGALLRERLGGKSE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatcatttgccgaactgttcgaagccagccagcaatacctggccaagctgaag
ccgggcgccatcgtcaccggtaccgttgtggaagtccgcagcgacgtggtggtgatcaac
gccggcctgaagtccgaaggcattgtgccgatcgaacagttccgtaacgacgccggcgag
atcgacgttgccgtgggcgacgaagtcaaggtcgcactcgactcgatcgagaacggcttt
ggcgaaaccgtgttgtcgcgcgagaaggccaagcgcgcgatggtgtgggacgagctcgaa
gaggcgctcgaaaagaacgagaccatcaccggccgcatcagcggcaaggtcaagggtggt
ttcaccgtcgacatcaaggatgtccgcggcttcctgcccggttcgctggtggacgtgcgc
ccggtgcgcgactccgcctacctggaaggcaaggaactcgagttcaagctgatcaagctg
gaccgcaagcgcaataacatcgtcgtctcccgccgcgcggtggtcgagagcgagtacagc
gtcgagcgcgaacagctgatggagaagctgcaggaaggcgcgatcctcaagggcgtggtc
aagaacctcaccgattacggcgcgttcgtggacctgggcggcatcgacggtctgctgcac
atcaccgacatggcgtggaagcgcgtgcgtcacccgtcggaagtggtcgaagtcggccag
gaactcgacgtgcgcgtgctcaagtacgaccgcgagcgcaaccgcgtcagcctcggcctc
aagcagctgggcgaggatccgtgggacaacatcgcccgtcgctacccggccaacacccgc
gtgttcggcaaggtcagcaacgtcaccgattacggcgcgttcgtcgagatcgagccgggc
gtggaaggtctggtccacgtgtccgaaatggattggaccaacaagaacgtcaacccgtcc
aagatcgtgcaggtcggcgatgaagttcaggtcatggtgctcgacgtcgatgaagagcgt
cgtcgtatctcgctgggcatgaagcaggtcacctcgaacccgtgggagaccttcgcggcc
atccacaagaagggtgacaaggtcgaaggccagatcaagtcgatcaccgacttcggcatc
ttcatcggcctggacggcggtatcgacggcctggtgcacctgtcggacatcagctggaac
accaccggcgaagacatcgtgcgcaacttcaagaagggcgacacgctggaagccgtggtc
ctggccgtggatccggagcgcgagcgcatctcgctcggcgtcaagcagctcgagcaggac
ccgatgggtcagtacgtcgcttccaacgccaagggctcgatcgtcaagggcgtggtcaag
gaagtcgacgccaagggcgccacgatcgaactggccgatggtatcgagggctacgtcgcc
gcgcgcgacatcgccaaggaacgcgtcgaagacgcctccacgtacctcaaggtcggccag
gaagtcgaagccaagatcatcggcaccgaccgcaagggccgcagcatgcagctgtcgatc
aaggcgaaggacgaagccgagcagcaggaagcgctgtcggactacaaccaccgcgcttcg
gaagcctccagcggcaccaccagcctcggcgcgttgctgcgcgagcgtctgggcggcaag
tccgagtaa
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