Lysobacter capsici: LC55x_2355
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Entry
LC55x_2355 CDS
T04162
Name
(GenBank) bacterial regulatory, tetR family protein
KO
K22041
TetR/AcrR family transcriptional regulator, copper-responsive repressor
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcp03000
]
LC55x_2355
Transcription factors [BR:
lcp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
LC55x_2355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_13_2
TetR_C_6
TetR_C_24
TetR_C_11
TetR_C_21
TetR_C_43
Motif
Other DBs
NCBI-ProteinID:
ALN85623
LinkDB
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Position
complement(2576308..2576973)
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AA seq
221 aa
AA seq
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MEIDVADSAPAGGGDAASETPPRRPRGRPRGFDREQALETAMHLFWRQGFEATSLSDLTA
AMGIAPPSLYAAFGSKEQLFREALQRYLQQFRARHAASLQAPGLSARAAFERLFDAIGDG
FAGCGQRSGCMLVAAEIGGVGASAPLREEIAAHRRSIESGFRARIERGQREGDVAADCDA
ERLAKFLATVVQGLSIQARDGANAAELRDVLRTALRAWPAG
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagatgttgcagattcggcaccagccggcgggggcgatgcggccagcgaaacg
ccgccgcgccggccgcgcggacggccgcgcgggttcgatcgcgagcaggccctggaaacc
gcgatgcacttgttctggcgccagggcttcgaggcgacctcgctgagcgatctgaccgcg
gccatgggcatcgccccgcccagcctgtacgccgccttcggcagcaaggagcagttgttc
cgcgaggcgctgcaacgctacctgcagcagttccgcgcgcgccacgccgccagcctgcag
gcgcccgggctaagcgcgcgcgcggcgttcgagcgcttgttcgacgccattggcgacggc
ttcgccggctgcggacaacgcagcggctgcatgctggtcgcggccgagatcggcggcgtc
ggcgcatcggcgcccttgcgcgaggaaatcgccgcgcatcgtcggtcgatcgaaagcgga
tttcgcgcccgcatcgaacgcggccagcgcgaaggcgacgtggccgccgattgcgacgcc
gagcgattggccaaatttctggccaccgtggtccagggcctgtcgatccaggcccgcgac
ggcgcgaacgcggccgaactgcgcgacgtgctgcgcaccgcgctgcgggcctggcccgcg
ggctga
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