Lysobacter capsici: LC55x_2376
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Entry
LC55x_2376 CDS
T04162
Name
(GenBank) radical SAM superfamily protein
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00860
Porphyrin metabolism
lcp01100
Metabolic pathways
lcp01110
Biosynthesis of secondary metabolites
lcp01240
Biosynthesis of cofactors
Module
lcp_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LC55x_2376
Enzymes [BR:
lcp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
LC55x_2376
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Motif
Pfam:
Radical_SAM
HemN_C
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ALN85642
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Position
complement(2592160..2593515)
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AA seq
451 aa
AA seq
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MPRLADLLRLPPYQAYSYSYPHKTAYRPIEPPRPLSQLWAGERRDALFLYLHVPFCSYRC
GFCNLFALARPDPAKVERYLQQMEHQLRATAAALGEHRFVRFALGGGTPTYLDAEQLRQV
FAMVERHANIDLRATPAGIEVSPETVDAEKLRVCREAGIDRVSMGIQSFSEAEVRALVRP
QQREVVERAIGAIRKAGFPTLNLDLIYGIAGQTVTSFLASIDSALSHAPEELYLYPLYVR
PLTGLGRIEAKNGGKTGFVLQPEPLDERLALYQAGRDRLLQAGYTQVSMRMFRAPHAPDL
AAPVYCCQSDGMVGIGCGARSYTGRLHYSSEYGVARRSVAEILDHYLARDEASFACADYG
IELDADEQRRRYVIQSLLIRPGLEHAGYRERFGADCLDDLPQLRDLIELGLADDDGALLA
LNDEGLARADTLGSWLTSAAIAQRMRDYRLG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccgagactggccgacctgctgcgcctgccgccgtatcaggcgtattcgtattcctac
ccgcacaagaccgcctaccggccgatcgagccgccgcgaccgctgtcgcagctgtgggcc
ggcgaacgccgcgacgccttgttcctgtacctgcacgtgccgttctgttcgtaccgctgc
ggcttctgcaatctgttcgcgctcgcgcgacccgacccggccaaggtcgaacgctatctg
cagcagatggaacatcaactgcgcgcgaccgccgcggcattgggcgaacaccgcttcgtg
cgcttcgccctcggcggcggcaccccgacgtatctggacgccgagcaattgcgccaagtg
ttcgcgatggtcgaacgccacgccaatatcgacctgcgcgccaccccagccgggatcgag
gtgtcgccggaaaccgtcgatgccgaaaaactgcgcgtatgccgcgaagccggcatcgac
cgggtcagcatgggcatccagagtttcagcgaagccgaggtgcgcgcgctggtgcggccg
cagcaacgcgaggtggtcgaacgcgcgatcggcgcgatccgcaaggccggtttccccacg
ctcaatctcgacctgatctacggcatcgccgggcagaccgtcaccagtttcctggcctcg
atcgacagcgcgctgagccatgcgcccgaagagttgtacctgtatccgctgtacgttcgg
ccgctgaccgggctgggccggatcgaagcaaaaaacggcggcaagaccggcttcgtgctg
caacccgaaccgctcgacgaacgcctcgcgctgtaccaggccggacgcgaccgcctgctg
caggccggctacacccaggtgtcgatgcgcatgttccgcgcgccgcacgcgcccgacctg
gccgcgccggtgtactgctgccagagcgacggcatggtcggcatcggctgcggcgcgcgc
tcgtacaccggccgcctgcattactccagcgaatacggcgtggcccggcgcagcgtcgcc
gagatcctcgatcactatctcgcccgcgacgaagcctcgttcgcctgcgccgattacggc
atcgaactcgacgccgacgaacaacgccgccgttacgtgatccagtcgctgctgatccgg
cccgggctggagcacgccggctaccgcgaacgcttcggcgccgactgcctcgacgacctg
ccgcagctgcgcgacctgatcgaactcggcctggccgacgacgacggcgcgctgctggcg
ctcaacgacgaaggcctcgcgcgcgccgacaccctcggctcgtggctgacctcggccgcg
atcgcgcaacgcatgcgcgactatcggctgggctga
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