Lysobacter capsici: LC55x_2482
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Entry
LC55x_2482 CDS
T04162
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00220
Arginine biosynthesis
lcp00240
Pyrimidine metabolism
lcp00250
Alanine, aspartate and glutamate metabolism
lcp01100
Metabolic pathways
lcp01110
Biosynthesis of secondary metabolites
lcp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LC55x_2482 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LC55x_2482 (carB)
00220 Arginine biosynthesis
LC55x_2482 (carB)
Enzymes [BR:
lcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LC55x_2482 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_5
ATP-grasp_3
BamE
Motif
Other DBs
NCBI-ProteinID:
ALN85747
LinkDB
All DBs
Position
2701050..2704295
Genome browser
AA seq
1081 aa
AA seq
DB search
MPKRTDIKTVLIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPNM
ADAVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADNGVLEKYNVELIGAKR
EAIRMAEDRELFRVAMKEIGLECPKAEVARTLEEAIDIQTRVGYPTIIRPSFTLGGSGGG
IAYNREELIDIVTRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENFDAM
GVHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINAQNGRVVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNEITGGATPASFEPSIDYVVTKIP
RFAFEKFPQADARLTTQMKSVGEVMAMGRTFQESLQKALRGLETGKVGLDPTGLDLGNEL
DLVKLRRELKEPGPERMFHIGDAFRAGMSVEDVHALSFVDPWFLDQIEELIATEGEIAEA
GLGALDKPRMRALKRMGFSDARIAQLTGTDETAVRTLRRAFGVRPVYKRVDSCAAEFATT
TAYMYSTYEDECEANPSNRDKIIVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPLTLEDVLEIADLEKPKGVIVQYGGQTPLKLARALEANGVP
IIGTSPDSIDLAEDRERFQKLVQDLGLAQPINRTARNPDEALMLANQIGYPMVVRPSYVL
GGRAMEIVYSDADLTRYIRDAVKVSNDSPVLLDRFLDNAVEVDVDIIADREGRVLIGGVM
EHIEEAGVHSGDSSCSLPPYSLSAGTQEKLREQVVALAKALKVVGLMNTQFAIQTDAQGN
DTIFLIEVNPRASRTVPFVSKATGMALAKIAARCMVGQTLASQGALEEIVPDYYSVKEAI
FPFAKFQGVDPILGPEMRSTGEVMGVGKNFGAAMARAQEAGGIKAPPVGKVFISVRDPDK
LRVLPVAQELLRRGYSLVATSGTQAFFAEHGVSCESVNKVTEGRPHIVDLIKNGEIVYII
NTTEGRQAISDSFSIRREALQQRVTYSTTVSGARALVGSLDYRGKGPVWSLQELHAQIGA
A
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgtaccgacatcaaaaccgtcctgatcatcggcgcgggtccgatcgtgatc
ggccaggcctgcgagttcgactactccggcgcgcaagcctgcaaggcgctgcgcgacgag
ggctaccgcgtggtcctggtcaattcgaatccggccacgatcatgaccgacccgaacatg
gccgacgccgtgtacatcgagccgatcaactggcagacggtcgagaagatcatcgccaag
gaaaagcccgacgcgctgctgccgaccatgggcgggcagaccgcgctgaactgcgcgctg
gacctggccgataacggcgtgctggagaagtacaacgtcgagctgatcggcgccaagcgc
gaagcgatccgcatggccgaggaccgcgagctgttccgcgtggcgatgaaggagatcggc
ctggaatgcccgaaggccgaagtcgcgcgcacgctggaagaggcgatcgacatccagacc
cgcgtcggctacccgaccatcattcgccccagcttcaccctcggcggcagcggcggcggc
atcgcctacaaccgcgaagagctgatcgatatcgtcacccgcggcctggaactgtcgccg
accaccgaagtgctggtcgaggaatcggtgctgggctggaaggaattcgagatggaagtg
gtccgcgacaccgcggacaactgcatcatcgtgtgctcgatcgaaaacttcgacgcgatg
ggcgtgcacaccggcgactcgatcaccgtcgctccggcgcagaccctcaccgacaaggaa
tatcagcgcctgcgcgatgcctcgatcgcggtgctgcgcaagatcggcgtcgataccggc
ggctccaacgtgcagttcggcatcaacgcccagaacggccgggtggtggtgatcgaaatg
aacccgcgcgtgtcgcgttcctcggcgctggcgtcgaaggccaccggcttcccgatcgcc
aagatcgcggccaagctcgcggtcggctacaccctcgatgaactgcgcaacgaaatcacc
ggcggcgcgaccccggcctcgttcgaaccgagcatcgactacgtcgtcaccaagatcccg
cgcttcgcgttcgagaagttcccgcaggccgacgcgcgcctgaccacgcagatgaagtcg
gtcggcgaagtcatggcgatgggccgcaccttccaggaatcgctgcagaaggcgctgcgc
ggtctggaaaccggcaaggtcggcctcgacccgaccggtctggacctgggcaacgaactc
gacctggtcaagctgcgccgcgaactcaaggaacccggtccggagcgcatgttccacatc
ggcgacgcgttccgcgccggcatgagcgtcgaggacgtgcatgcgctgtcgttcgtcgat
ccgtggttcttggaccagatcgaggaattgatcgcgaccgagggcgagatcgccgaggcc
ggcctgggcgcgctcgacaagccgcgcatgcgcgcgctcaagcgcatgggcttttccgat
gcgcgcatcgcccagctcaccggcaccgacgaaaccgccgtgcgcacgctgcgccgcgcg
ttcggcgtgcgtccggtgtacaagcgcgtggactcctgcgccgccgagttcgccaccacc
accgcctacatgtactcgacctacgaggacgagtgcgaagccaacccgagcaaccgcgac
aagatcatcgtgctcggcggcggccccaaccgcatcggccagggcatcgagttcgactac
tgctgcgtgcatgcagcgctcgctctgcgcgaggacggctatgaaaccatcatggtcaac
tgcaatccggaaaccgtgtcgaccgactacgacacctccgatcgcctgtacttcgaaccg
ctgacgctcgaggacgtgctggaaatcgccgacctcgaaaagcccaagggcgtgatcgtg
cagtacggcggccagaccccgctcaagctggcgcgcgcgctggaagccaacggcgtgccg
atcatcggcacctcgcccgacagcatcgacctggccgaagaccgcgagcgtttccagaag
ctggtgcaggacctgggcctggcccagccgatcaaccgcaccgcgcgcaatcccgatgaa
gcgctgatgctggccaaccagatcggttatccgatggtggtgcgtccgagctacgtgctc
ggcggccgggcgatggaaatcgtttattccgacgccgacctgacccgttacatccgcgac
gcagtcaaggtgtcgaacgattcgccggtgctgctcgaccgcttcctcgacaacgcggtc
gaggtcgacgtcgacatcatcgccgaccgcgaaggccgggtgctgatcggcggcgtgatg
gagcacatcgaagaggccggcgtgcattcgggcgactcctcgtgctcgctgccgccgtat
tcgctcagcgccggcacccaggaaaaactgcgcgagcaggtcgtggcgctggccaaggcg
ctcaaggtggtcgggctgatgaacacccagttcgcgatccagaccgatgcgcagggcaac
gacacgatcttcctgatcgaagtgaacccgcgcgcctcgcgcacggtgccgttcgtgtcc
aaggccaccggcatggcgctggcgaagatcgccgcgcgctgcatggtcggccagaccctg
gcttcgcagggcgcgctggaagaaatcgtgccggactactactcggtcaaggaagcgatc
ttcccgttcgccaagttccagggcgtcgacccgatcctcgggccggagatgcgctccacc
ggcgaagtgatgggcgtgggcaagaacttcggcgcggcgatggcgcgcgcgcaggaagcc
ggcggcatcaaggcgccgccggtcggcaaggtgttcatctcggtccgcgacccggacaag
ctgcgggtgctgccggtggcgcaggagctgctgcgccgcggctacagtctggtcgcgacc
agcggcacccaggccttcttcgccgaacacggcgtgagctgcgaatcggtcaacaaggtc
accgaaggccgcccgcacatcgtcgacctgatcaagaacggcgagatcgtctacatcatc
aacaccaccgaaggccgtcaggcgatctcggactcgttctcgatccgccgcgaggccctg
cagcagcgggtgacgtactcgaccacggtgtcgggcgcgcgcgcgctggtgggctcgctg
gactatcgcggcaagggcccggtgtggtcgttgcaggagctgcatgcgcagattggcgcg
gcgtaa
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