Lysobacter capsici: LC55x_2502
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Entry
LC55x_2502 CDS
T04162
Symbol
fadD
Name
(GenBank) fadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00061
Fatty acid biosynthesis
lcp00071
Fatty acid degradation
lcp01100
Metabolic pathways
lcp01212
Fatty acid metabolism
lcp02024
Quorum sensing
lcp04146
Peroxisome
Module
lcp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LC55x_2502 (fadD)
00071 Fatty acid degradation
LC55x_2502 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LC55x_2502 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC55x_2502 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lcp01004
]
LC55x_2502 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcp04147
]
LC55x_2502 (fadD)
Enzymes [BR:
lcp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LC55x_2502 (fadD)
Lipid biosynthesis proteins [BR:
lcp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LC55x_2502 (fadD)
Exosome [BR:
lcp04147
]
Exosomal proteins
Exosomal proteins of breast milk
LC55x_2502 (fadD)
Exosomal proteins of breast cancer cells
LC55x_2502 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ALN85767
LinkDB
All DBs
Position
complement(2738054..2739727)
Genome browser
AA seq
557 aa
AA seq
DB search
MSLERPWLAQYPQDVPAQIDVEEFPSVVSVLENAIEKYRDRPAFSNFGKVLTYGDIDRLS
AQFAAYLLGELKLKKGDRVAIMMPNCLQYPIATFGVLRAGLTVVNTNPMYTARELKHQLV
DSGASVIFVLDNFGDTVQSVVADTPIKQVITTGLGDMIGGLKGPIMNFVLKYVKKMVPEY
DIPGAVRFRDTLTLGQMHKLPQVEISPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQA
AAWVGTNAKLGQEIIITALPLYHIFALTANGLVFMKFGGLNHMITNPRDMPAFVKELKNT
PFTAITGVNTLFNGLLNTPGFAEVDFSKLHLTLGGGMAVQRSVADRWKEVTGVTLIEAYG
LTETSPAACINPMDLPAYNGAIGLPISSTDACVQDENFNILGVGEVGELCIKGPQVMKGY
WQRPKETDDVIDKDGWLHTGDMARMDEKGYFYIVDRKKDMILVSGFNVYPNEIEDVIAMM
PGVLEVAAVGVPDDKSGEAVKVVIVKKDQALTAEEVKAHARLNLTGYKHPKYVEFRKELP
KTNVGKILRRELRDAPK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggaacgtccgtggcttgcccaatatccgcaagacgtgcccgcacagatcgac
gtggaggaatttccgtcggtggtgtcggtgctggaaaacgcgatcgaaaaataccgcgac
cgccccgctttctccaatttcggcaaggtcctgacctacggcgacatcgaccggctcagc
gcgcagttcgccgcttacctgctcggcgagctcaagctcaagaagggcgatcgcgtcgcg
atcatgatgcccaactgcctgcagtacccgatcgcgaccttcggcgtgctgcgcgccggg
ctgaccgtggtcaacaccaatccgatgtacaccgcgcgcgagctcaagcatcagctggtg
gactcgggcgcgtcggtgatcttcgtgctcgacaacttcggcgacaccgtgcagagcgtg
gtcgccgacacgccgatcaagcaggtcatcaccaccggactgggcgacatgatcggcggg
ctcaagggcccgatcatgaacttcgtgctcaagtacgtgaaaaagatggtgcccgagtac
gatattccgggcgcggtgcggtttcgcgacacgctgaccctcgggcagatgcacaagctg
ccgcaggtggagatttcgccggacgatatcgcgttcctgcaatacaccggcggtaccacg
ggtgtcgccaagggggcgatgctcacgcaccgtaacttggtcgcgaacatgcagcaggcc
gcggcctgggtcggcaccaacgccaagctcggccaggaaatcatcatcaccgcgctgccg
ctgtaccacatcttcgcgttgacggcgaacggactggtgttcatgaagttcggcggcctc
aaccacatgatcaccaacccgcgcgacatgccggcgttcgtgaaggagctcaagaacacc
ccgttcactgcgatcaccggcgtcaacaccctgttcaacggcctgctcaacacgcccggt
ttcgccgaggtcgatttctccaagctgcacctgaccctcggcggcggcatggccgtgcaa
cgctcggtcgccgatcgctggaaggaagtcaccggcgtgaccctgatcgaggcctacggc
ctgaccgagacctcgcccgcggcctgcatcaacccgatggacctgcccgcctacaacggc
gcgatcggcctgccgatctcttcgaccgacgcctgcgtgcaggacgagaacttcaacatc
ctcggcgtgggcgaagtcggcgagctgtgcatcaagggcccgcaggtgatgaagggctat
tggcagcggccgaaggaaaccgacgacgtcatcgacaaggacggctggctgcacacaggc
gacatggcacggatggacgagaagggctacttctatatcgtcgaccgcaagaaggacatg
atcctggtgtcgggcttcaacgtgtaccccaacgagatcgaggacgtgatcgcgatgatg
cccggcgtgctcgaagtcgccgcggtcggcgtacccgacgacaagtccggcgaagcggtc
aaggtggtgatcgtcaagaaggaccaggccctgaccgccgaagaggtcaaggcgcatgcg
cgcctcaacctgaccggctacaagcatcccaagtacgtggagttccgcaaggaactgccc
aagaccaacgtcggcaagatcctgcgccgcgagctgcgcgacgcgcccaagtaa
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