Lysobacter capsici: LC55x_2572
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Entry
LC55x_2572 CDS
T04162
Name
(GenBank) ku protein
KO
K10979
DNA end-binding protein Ku
Organism
lcp
Lysobacter capsici
Pathway
lcp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LC55x_2572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcp03400
]
LC55x_2572
DNA repair and recombination proteins [BR:
lcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LC55x_2572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ALN85837
LinkDB
All DBs
Position
2827127..2828038
Genome browser
AA seq
303 aa
AA seq
DB search
MARPIWTGTLSFGLLNIPVKLMTGERRVDLHFRMLDSRNKAPIRYERVNEETGEEVPWKE
IVKAFEYDKGSYVVIEEADIAAASPDNKESVDIDTFVDADSIGAQFFEKPYILEPGKKAE
KGYVLLREVLKRSGKVGIGRVVIRTREYLAAVMPHGEALLLMILRYAQELVDPADYKLPE
GGLAKWKISPREIDMAEQLIKSMSSQWQPDSYKDDFRQRLHKVIEQRVKSKKVVRGKDTD
EAKLPENAATNVIDFAELLKRSLSKKSGGAQAAPAQAGKKTAKKAAKKTARKAPAKKRAR
KSA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcccgatctggaccggtaccctgtcgttcggcctgctcaatatcccggtcaag
ctgatgaccggcgagcgccgcgtcgacctgcatttccgcatgctcgacagccgcaacaag
gcgccgatccgctacgagcgggtcaacgaggaaaccggcgaagaggtgccgtggaaggaa
atcgtcaaggcgttcgaatacgacaagggcagctatgtggtgatcgaggaggccgatatc
gccgcggcctcgccggacaacaaggagagcgtcgacatcgataccttcgtcgacgccgac
tcgatcggcgcgcagttctttgagaagccctacatcctggagccgggcaagaaagccgag
aagggctatgtgctgctgcgcgaagtgctcaagcgcagcggcaaggtcgggatcggccgg
gtggtgatccgcacccgcgaatacctggccgcggtgatgccgcacggcgaagccttgctg
ttgatgatcctgcgctacgcccaggaactggtcgatccggccgactacaaactgcccgag
ggcggcttggcgaagtggaagatctcgccgcgcgagatcgacatggccgagcagttgatc
aagtcgatgagcagccagtggcagcccgacagctacaaggacgacttccgtcagcgcctg
cacaaggtgatcgagcaacgggtcaagtcgaagaaggtggtgcgcggcaaggacaccgac
gaggccaagctgcccgaaaacgcggcgaccaacgtcatcgacttcgccgagctgctcaag
cgcagcctgagcaagaagagcggtggcgctcaggccgcgccggcgcaggcgggcaagaaa
accgcgaagaaggcggcgaagaagaccgcgcgcaaggcgccggccaagaaacgcgcacgc
aagtcggcctga
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